PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
HhamSuperscaffold10002860 Alkaloid PMT low borderline
HhamSuperscaffold10002880 Alkaloid PMT low borderline
HhamSuperscaffold100048690 Alkaloid PMT low borderline
HhamSuperscaffold100049400 Alkaloid PMT medium pass
HhamSuperscaffold100055420 Alkaloid PMT low borderline
HhamSuperscaffold100074090 Alkaloid PMT medium pass
HhamSuperscaffold110084230 Alkaloid PMT low borderline
HhamSuperscaffold110084710 Alkaloid PMT medium pass
HhamSuperscaffold110084760 Alkaloid PMT low borderline
HhamSuperscaffold120117080 Alkaloid PMT low borderline
HhamSuperscaffold130148510 Alkaloid PMT low borderline
HhamSuperscaffold130152540 Alkaloid PMT low borderline
HhamSuperscaffold130152550 Alkaloid PMT low borderline
HhamSuperscaffold130152570 Alkaloid PMT low borderline
HhamSuperscaffold140173920 Alkaloid PMT medium borderline
HhamSuperscaffold150181840 Alkaloid PMT medium borderline
HhamSuperscaffold160210940 Alkaloid PMT low borderline
HhamSuperscaffold160220000 Alkaloid PMT medium pass
HhamSuperscaffold170230960 Alkaloid PMT medium pass
HhamSuperscaffold180245040 Alkaloid PMT low borderline
HhamSuperscaffold180248640 Alkaloid PMT low borderline
HhamSuperscaffold200335860 Alkaloid PMT low borderline
HhamSuperscaffold200346390 Alkaloid PMT medium pass
HhamSuperscaffold20321750 Alkaloid PMT low borderline
HhamSuperscaffold210352370 Alkaloid PMT low borderline
HhamSuperscaffold210352380 Alkaloid PMT low borderline
HhamSuperscaffold220386160 Alkaloid PMT medium pass
HhamSuperscaffold220386180 Alkaloid PMT low borderline
HhamSuperscaffold220386190 Alkaloid PMT low borderline
HhamSuperscaffold240435210 Alkaloid PMT low borderline
HhamSuperscaffold250442540 Alkaloid PMT medium borderline
HhamSuperscaffold290516490 Alkaloid PMT low borderline
HhamSuperscaffold30547970 Alkaloid PMT medium pass
HhamSuperscaffold30553180 Alkaloid PMT low borderline
HhamSuperscaffold30561340 Alkaloid PMT medium borderline
HhamSuperscaffold310602760 Alkaloid PMT medium borderline
HhamSuperscaffold330650780 Alkaloid PMT low borderline
HhamSuperscaffold330650840 Alkaloid PMT low borderline
HhamSuperscaffold340666030 Alkaloid PMT medium pass
HhamSuperscaffold340666040 Alkaloid PMT medium pass
HhamSuperscaffold350677610 Alkaloid PMT low borderline
HhamSuperscaffold380731200 Alkaloid PMT low borderline
HhamSuperscaffold390734250 Alkaloid PMT medium borderline
HhamSuperscaffold400786770 Alkaloid PMT medium pass
HhamSuperscaffold400786780 Alkaloid PMT medium pass
HhamSuperscaffold40751380 Alkaloid PMT medium borderline
HhamSuperscaffold40761520 Alkaloid PMT low borderline
HhamSuperscaffold410802080 Alkaloid PMT medium borderline
HhamSuperscaffold440853150 Alkaloid PMT medium pass
HhamSuperscaffold50889440 Alkaloid PMT low borderline