PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
HhamSuperscaffold10007970 Alkaloid T16H medium borderline
HhamSuperscaffold10012650 Alkaloid T16H medium borderline
HhamSuperscaffold10041320 Alkaloid T16H medium borderline
HhamSuperscaffold110093620 Alkaloid T16H medium borderline
HhamSuperscaffold110093970 Alkaloid T16H medium borderline
HhamSuperscaffold120115710 Alkaloid T16H medium borderline
HhamSuperscaffold120120870 Alkaloid T16H medium borderline
HhamSuperscaffold160203760 Alkaloid T16H low borderline
HhamSuperscaffold160204030 Alkaloid T16H medium borderline
HhamSuperscaffold170221700 Alkaloid T16H medium borderline
HhamSuperscaffold170227380 Alkaloid T16H low borderline
HhamSuperscaffold170227500 Alkaloid T16H medium borderline
HhamSuperscaffold170239480 Alkaloid T16H medium borderline
HhamSuperscaffold180246800 Alkaloid T16H low borderline
HhamSuperscaffold190276860 Alkaloid T16H medium borderline
HhamSuperscaffold190284830 Alkaloid T16H medium borderline
HhamSuperscaffold200336660 Alkaloid T16H medium borderline
HhamSuperscaffold200340100 Alkaloid T16H medium borderline
HhamSuperscaffold200340570 Alkaloid T16H medium borderline
HhamSuperscaffold200346340 Alkaloid T16H medium borderline
HhamSuperscaffold200351630 Alkaloid T16H medium borderline
HhamSuperscaffold20289780 Alkaloid T16H medium pass
HhamSuperscaffold20297160 Alkaloid T16H low borderline
HhamSuperscaffold20307030 Alkaloid T16H medium borderline
HhamSuperscaffold20315630 Alkaloid T16H medium borderline
HhamSuperscaffold210363880 Alkaloid T16H medium borderline
HhamSuperscaffold220385950 Alkaloid T16H medium borderline
HhamSuperscaffold230396930 Alkaloid T16H medium borderline
HhamSuperscaffold230409400 Alkaloid T16H medium borderline
HhamSuperscaffold230409480 Alkaloid T16H medium borderline
HhamSuperscaffold230409500 Alkaloid T16H medium borderline
HhamSuperscaffold240427060 Alkaloid T16H low borderline
HhamSuperscaffold250446110 Alkaloid T16H medium borderline
HhamSuperscaffold260473990 Alkaloid T16H medium borderline
HhamSuperscaffold260475160 Alkaloid T16H medium borderline
HhamSuperscaffold270490140 Alkaloid T16H medium borderline
HhamSuperscaffold280497830 Alkaloid T16H medium borderline
HhamSuperscaffold280503890 Alkaloid T16H medium borderline
HhamSuperscaffold300588950 Alkaloid T16H medium borderline
HhamSuperscaffold30554580 Alkaloid T16H medium borderline
HhamSuperscaffold30554910 Alkaloid T16H medium borderline
HhamSuperscaffold30554930 Alkaloid T16H medium borderline
HhamSuperscaffold30554950 Alkaloid T16H medium borderline
HhamSuperscaffold30556510 Alkaloid T16H low borderline
HhamSuperscaffold320625990 Alkaloid T16H low borderline
HhamSuperscaffold320634760 Alkaloid T16H low borderline
HhamSuperscaffold330640880 Alkaloid T16H medium borderline
HhamSuperscaffold330641360 Alkaloid T16H medium borderline
HhamSuperscaffold330643170 Alkaloid T16H medium borderline
HhamSuperscaffold330644470 Alkaloid T16H medium borderline