PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GGPPS
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Gene Pathway Family Confidence Status
HhamSuperscaffold130128090 Terpenoid GGPPS medium borderline
HhamSuperscaffold140158380 Terpenoid GGPPS medium borderline
HhamSuperscaffold150198160 Terpenoid GGPPS medium borderline
HhamSuperscaffold200345620 Terpenoid GGPPS medium borderline
HhamSuperscaffold20331850 Terpenoid GGPPS medium borderline
HhamSuperscaffold220385690 Terpenoid GGPPS medium borderline
HhamSuperscaffold230393400 Terpenoid GGPPS medium borderline
HhamSuperscaffold230409130 Terpenoid GGPPS medium pass
HhamSuperscaffold240418360 Terpenoid GGPPS medium borderline
HhamSuperscaffold240421800 Terpenoid GGPPS medium borderline
HhamSuperscaffold250457500 Terpenoid GGPPS medium borderline
HhamSuperscaffold260464550 Terpenoid GGPPS medium borderline
HhamSuperscaffold280498740 Terpenoid GGPPS medium borderline
HhamSuperscaffold300596210 Terpenoid GGPPS medium borderline
HhamSuperscaffold340665670 Terpenoid GGPPS medium borderline
HhamSuperscaffold440854130 Terpenoid GGPPS medium borderline
HhamSuperscaffold460881000 Terpenoid GGPPS low borderline
HhamSuperscaffold460882830 Terpenoid GGPPS medium borderline
HhamSuperscaffold50910420 Terpenoid GGPPS medium borderline
HhamSuperscaffold70991820 Terpenoid GGPPS medium borderline
HhamSuperscaffold80996350 Terpenoid GGPPS medium borderline
HhamSuperscaffold80998290 Terpenoid GGPPS medium borderline
HhamSuperscaffold81016060 Terpenoid GGPPS medium borderline