PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
HhamSuperscaffold330637230 Phenylpropanoid 4CL low borderline
HhamSuperscaffold330642310 Phenylpropanoid 4CL medium pass
HhamSuperscaffold330645490 Phenylpropanoid 4CL medium pass
HhamSuperscaffold330647140 Phenylpropanoid 4CL medium pass
HhamSuperscaffold340659310 Phenylpropanoid 4CL low borderline
HhamSuperscaffold350682220 Phenylpropanoid 4CL medium pass
HhamSuperscaffold360684350 Phenylpropanoid 4CL low borderline
HhamSuperscaffold360693570 Phenylpropanoid 4CL low borderline
HhamSuperscaffold360696160 Phenylpropanoid 4CL medium pass
HhamSuperscaffold360696220 Phenylpropanoid 4CL medium pass
HhamSuperscaffold370707510 Phenylpropanoid 4CL medium pass
HhamSuperscaffold380716630 Phenylpropanoid 4CL low borderline
HhamSuperscaffold380727760 Phenylpropanoid 4CL medium pass
HhamSuperscaffold390735150 Phenylpropanoid 4CL low borderline
HhamSuperscaffold390739100 Phenylpropanoid 4CL low borderline
HhamSuperscaffold390743730 Phenylpropanoid 4CL medium pass
HhamSuperscaffold390746400 Phenylpropanoid 4CL medium pass
HhamSuperscaffold400793190 Phenylpropanoid 4CL low borderline
HhamSuperscaffold400795800 Phenylpropanoid 4CL medium pass
HhamSuperscaffold400800300 Phenylpropanoid 4CL medium pass
HhamSuperscaffold400800310 Phenylpropanoid 4CL medium pass
HhamSuperscaffold400800330 Phenylpropanoid 4CL medium pass
HhamSuperscaffold400800340 Phenylpropanoid 4CL medium pass
HhamSuperscaffold40750590 Phenylpropanoid 4CL medium pass
HhamSuperscaffold40753730 Phenylpropanoid 4CL low borderline
HhamSuperscaffold40759710 Phenylpropanoid 4CL medium pass
HhamSuperscaffold40773290 Phenylpropanoid 4CL medium pass
HhamSuperscaffold40778260 Phenylpropanoid 4CL medium pass
HhamSuperscaffold40782830 Phenylpropanoid 4CL medium pass
HhamSuperscaffold410813050 Phenylpropanoid 4CL medium pass
HhamSuperscaffold440851010 Phenylpropanoid 4CL medium pass
HhamSuperscaffold440852160 Phenylpropanoid 4CL low borderline
HhamSuperscaffold440856750 Phenylpropanoid 4CL low borderline
HhamSuperscaffold440857530 Phenylpropanoid 4CL medium pass
HhamSuperscaffold460879590 Phenylpropanoid 4CL medium pass
HhamSuperscaffold460880090 Phenylpropanoid 4CL medium pass
HhamSuperscaffold460880110 Phenylpropanoid 4CL low borderline
HhamSuperscaffold50895920 Phenylpropanoid 4CL medium pass
HhamSuperscaffold50901980 Phenylpropanoid 4CL medium pass
HhamSuperscaffold50911080 Phenylpropanoid 4CL low borderline
HhamSuperscaffold60924470 Phenylpropanoid 4CL medium pass
HhamSuperscaffold60931550 Phenylpropanoid 4CL medium pass
HhamSuperscaffold60948990 Phenylpropanoid 4CL low borderline
HhamSuperscaffold70965900 Phenylpropanoid 4CL medium pass
HhamSuperscaffold70965930 Phenylpropanoid 4CL medium pass
HhamSuperscaffold70972660 Phenylpropanoid 4CL medium pass
HhamSuperscaffold70972670 Phenylpropanoid 4CL medium pass
HhamSuperscaffold70976970 Phenylpropanoid 4CL low borderline
HhamSuperscaffold70981330 Phenylpropanoid 4CL medium pass
HhamSuperscaffold70982690 Phenylpropanoid 4CL medium pass