PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
HhamSuperscaffold170238340 Alkaloid 7DLGT medium pass
HhamSuperscaffold180243840 Alkaloid 7DLGT low borderline
HhamSuperscaffold180243850 Alkaloid 7DLGT low borderline
HhamSuperscaffold180243860 Alkaloid 7DLGT low borderline
HhamSuperscaffold180243880 Alkaloid 7DLGT low borderline
HhamSuperscaffold180248080 Alkaloid 7DLGT low borderline
HhamSuperscaffold180254790 Alkaloid 7DLGT high pass
HhamSuperscaffold180260890 Alkaloid 7DLGT low borderline
HhamSuperscaffold180261410 Alkaloid 7DLGT low borderline
HhamSuperscaffold190270080 Alkaloid 7DLGT medium pass
HhamSuperscaffold190272900 Alkaloid 7DLGT low borderline
HhamSuperscaffold190272920 Alkaloid 7DLGT low borderline
HhamSuperscaffold190272960 Alkaloid 7DLGT low borderline
HhamSuperscaffold190272980 Alkaloid 7DLGT low borderline
HhamSuperscaffold190273000 Alkaloid 7DLGT low borderline
HhamSuperscaffold190273520 Alkaloid 7DLGT medium pass
HhamSuperscaffold190273550 Alkaloid 7DLGT low borderline
HhamSuperscaffold190274670 Alkaloid 7DLGT medium pass
HhamSuperscaffold190277440 Alkaloid 7DLGT medium pass
HhamSuperscaffold190280780 Alkaloid 7DLGT medium pass
HhamSuperscaffold190280790 Alkaloid 7DLGT medium pass
HhamSuperscaffold190280800 Alkaloid 7DLGT medium pass
HhamSuperscaffold190281080 Alkaloid 7DLGT low borderline
HhamSuperscaffold190282270 Alkaloid 7DLGT high pass
HhamSuperscaffold190282280 Alkaloid 7DLGT high pass
HhamSuperscaffold190285800 Alkaloid 7DLGT low borderline
HhamSuperscaffold200338760 Alkaloid 7DLGT medium pass
HhamSuperscaffold20289840 Alkaloid 7DLGT low borderline
HhamSuperscaffold20289860 Alkaloid 7DLGT medium pass
HhamSuperscaffold20290080 Alkaloid 7DLGT low borderline
HhamSuperscaffold20294120 Alkaloid 7DLGT low borderline
HhamSuperscaffold20302350 Alkaloid 7DLGT low borderline
HhamSuperscaffold20305730 Alkaloid 7DLGT low borderline
HhamSuperscaffold20305750 Alkaloid 7DLGT low borderline
HhamSuperscaffold20305770 Alkaloid 7DLGT medium pass
HhamSuperscaffold20306900 Alkaloid 7DLGT medium pass
HhamSuperscaffold20313150 Alkaloid 7DLGT low borderline
HhamSuperscaffold20320760 Alkaloid 7DLGT low borderline
HhamSuperscaffold20325260 Alkaloid 7DLGT medium pass
HhamSuperscaffold20333210 Alkaloid 7DLGT low borderline
HhamSuperscaffold20333260 Alkaloid 7DLGT low borderline
HhamSuperscaffold20333270 Alkaloid 7DLGT low borderline
HhamSuperscaffold20333280 Alkaloid 7DLGT low borderline
HhamSuperscaffold20333290 Alkaloid 7DLGT low borderline
HhamSuperscaffold20335090 Alkaloid 7DLGT high pass
HhamSuperscaffold210359670 Alkaloid 7DLGT low borderline
HhamSuperscaffold210366240 Alkaloid 7DLGT medium pass
HhamSuperscaffold210366250 Alkaloid 7DLGT medium pass
HhamSuperscaffold210366260 Alkaloid 7DLGT low borderline
HhamSuperscaffold210367450 Alkaloid 7DLGT low borderline