Hibiscus hamabo (hibiscus_hamabo)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 28.72% Phenylpropanoid pathway 23.94% Alkaloid pathway 20.15% Flavonoid pathway 11.51% Rosmarinic acid pathway 9.21% Steroid pathway 6.46%

Family Distribution

10326 Family-Level Calls

C4H 6.55% C3'H/CYP98A 5.88% BAHD 5.79% CYP76 3.97% POD 3.88% 4CL 3.86% IFS 3.78% T3O 3.62%

Other Families 62.67%

More Families (97)

F3H 371 3.59% UGT 296 2.87% 7DLGT 258 2.5% UFGT 253 2.45% NMT 243 2.35% CODM/T6ODM 226 2.19% DWF4/CYP90B1 214 2.07% F3'H/CYP75B 205 1.99% BR6OX2/CYP85A2 204 1.98% H6H 198 1.92% STR 178 1.72% LAC 173 1.68% CAD 165 1.6% CAS 146 1.41% CYP71 144 1.39% SMT1/SMT2/SMT3 121 1.17% TRI/TRII 110 1.07% CYP90D1 110 1.07% TPS 110 1.07% CSE 101 0.98% HCT 100 0.97% GES 99 0.96% COMT 95 0.92% IFR 93 0.9% PYKS 83 0.8% T16H 83 0.8% IO 82 0.79% RAS 78 0.76% F5H/CYP84A 74 0.72% G8O/G8H 73 0.71% TAT 73 0.71% GS 71 0.69% BBE 70 0.68% ANR 70 0.68% 7DLH 69 0.67% CPD/CYP90A1 67 0.65% PAL 66 0.64% NCS 64 0.62% FNS 64 0.62% PMT 61 0.59% SLS 57 0.55% F3'5'H/CYP75A 57 0.55% 16OMT 55 0.53% ANS/LDOX 50 0.48% BR6OX1/CYP85A1 47 0.46% CCR 46 0.45% SGD 43 0.42% COR 42 0.41% CYP51G1 37 0.36% 8HGO 35 0.34% DFR 35 0.34% SQE 33 0.32% CNMT 31 0.3% CPR 28 0.27% FPPS 27 0.26% CCoAOMT 23 0.22% ROT3/CYP90C1 23 0.22% GGPPS 23 0.22% SMO1/SMO2 22 0.21% MPO 21 0.2% LAMT 21 0.2% DXS 21 0.2% AACT 20 0.19% HMGR 20 0.19% CHS 19 0.18% TYDC_DDC 18 0.17% ISY 17 0.16% CYP719 16 0.15% MVD 16 0.15% CYP80B1 14 0.14% SQS/FDFT1 14 0.14% MVK 14 0.14% HMGS 13 0.13% HPPR 12 0.12% IDI 11 0.11% TDC 10 0.1% CHI 10 0.1% XMT_MXMT_DXMT 8 0.08% ADC 8 0.08% DWF1 8 0.08% FLS 7 0.07% DET2 7 0.07% HDR/IspH 7 0.07% 6OMT_4OMT_SOMT 6 0.06% ODC 6 0.06% MCT/IspD 6 0.06% DXR 6 0.06% MDS/IspF 6 0.06% PMK 6 0.06% HYD1 5 0.05% HDS/IspG 5 0.05% FK 4 0.04% CPI1 4 0.04% DWF7 3 0.03% DWF5 3 0.03% CMK/IspE 3 0.03% GPPS 1 0.01%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	1160	21	BAHD (466)	View species results
Phenylpropanoid pathway	967	13	POD (369)	View species results
Alkaloid pathway	814	27	NMT (125)	View species results
Flavonoid pathway	465	14	UFGT (231)	View species results
Rosmarinic acid pathway	372	7	C4H (135)	View species results
Steroid pathway	261	15	CAS (118)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	23	4033	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	776	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
HhamSuperscaffold190278040	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
HhamSuperscaffold190278050	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
HhamSuperscaffold190278140	Terpenoid	BAHD	medium	pass	BAHD__00097__sp_Q9ZV87_NAPES_ARATH
HhamSuperscaffold190278350	Terpenoid	BAHD	medium	pass	BAHD__00051__sp_Q7XA86_ZDH11_ARATH
HhamSuperscaffold190285170	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
HhamSuperscaffold190285190	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
HhamSuperscaffold190285770	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
HhamSuperscaffold190288930	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
HhamSuperscaffold200335860	Terpenoid	BAHD	medium	pass	BAHD__00031__sp_P0DO25_AT9_ACTDE
HhamSuperscaffold200337490	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
HhamSuperscaffold200338160	Terpenoid	BAHD	medium	pass	BAHD__00042__sp_Q500Z2_ZDH20_ARATH
HhamSuperscaffold200343920	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
HhamSuperscaffold200343930	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
HhamSuperscaffold200346390	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
HhamSuperscaffold20292470	Terpenoid	BAHD	medium	pass	BAHD__00089__sp_Q9SB58_ZDH19_ARATH
HhamSuperscaffold20294250	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
HhamSuperscaffold20295960	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
HhamSuperscaffold20296640	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
HhamSuperscaffold20298310	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
HhamSuperscaffold20298790	Terpenoid	BAHD	low	borderline	BAHD__00047__sp_Q5KS41_WSD11_ARATH
HhamSuperscaffold20301420	Terpenoid	BAHD	medium	pass	BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
HhamSuperscaffold20301430	Terpenoid	BAHD	medium	pass	BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
HhamSuperscaffold20307630	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
HhamSuperscaffold20308800	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
HhamSuperscaffold20309390	Terpenoid	BAHD	medium	pass	BAHD__00024__sp_O23393_BIA1_ARATH
HhamSuperscaffold20310000	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
HhamSuperscaffold20310380	Terpenoid	BAHD	medium	pass	BAHD__00051__sp_Q7XA86_ZDH11_ARATH
HhamSuperscaffold20314420	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
HhamSuperscaffold20314560	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
HhamSuperscaffold20316860	Terpenoid	BAHD	medium	pass	BAHD__00028__sp_O80467_SDT_ARATH
HhamSuperscaffold20325150	Terpenoid	BAHD	medium	pass	BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
HhamSuperscaffold20325670	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
HhamSuperscaffold20325680	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
HhamSuperscaffold20327280	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
HhamSuperscaffold20327630	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
HhamSuperscaffold20328900	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
HhamSuperscaffold20329530	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
HhamSuperscaffold20330320	Terpenoid	BAHD	medium	pass	BAHD__00032__sp_P0DO84_AT_STRNX
HhamSuperscaffold20330400	Terpenoid	BAHD	low	borderline	BAHD__00032__sp_P0DO84_AT_STRNX
HhamSuperscaffold20331960	Terpenoid	BAHD	low	borderline	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
HhamSuperscaffold210355900	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
HhamSuperscaffold210358390	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
HhamSuperscaffold210363690	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
HhamSuperscaffold210363950	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
HhamSuperscaffold220378320	Terpenoid	BAHD	medium	pass	BAHD__00034__sp_P10349_GPAT2_CUCMO
HhamSuperscaffold220381790	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
HhamSuperscaffold220383380	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
HhamSuperscaffold220384800	Terpenoid	BAHD	medium	pass	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
HhamSuperscaffold220386160	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
HhamSuperscaffold220386170	Terpenoid	BAHD	medium	pass	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC