PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
HhamSuperscaffold440848150 Alkaloid BBE medium borderline
HhamSuperscaffold440848180 Alkaloid BBE medium borderline
HhamSuperscaffold450874930 Alkaloid BBE medium borderline
HhamSuperscaffold460880320 Alkaloid BBE medium borderline
HhamSuperscaffold460880360 Alkaloid BBE medium borderline
HhamSuperscaffold50891170 Alkaloid BBE medium borderline
HhamSuperscaffold50900760 Alkaloid BBE low borderline
HhamSuperscaffold50904790 Alkaloid BBE medium borderline
HhamSuperscaffold50905480 Alkaloid BBE medium borderline
HhamSuperscaffold50905490 Alkaloid BBE medium borderline
HhamSuperscaffold60960170 Alkaloid BBE medium borderline
HhamSuperscaffold60960180 Alkaloid BBE medium borderline
HhamSuperscaffold60960190 Alkaloid BBE medium borderline
HhamSuperscaffold81000850 Alkaloid BBE medium borderline
HhamSuperscaffold81000860 Alkaloid BBE medium borderline
HhamSuperscaffold81000870 Alkaloid BBE medium borderline
HhamSuperscaffold81002580 Alkaloid BBE medium borderline
HhamSuperscaffold91037490 Alkaloid BBE medium borderline
HhamSuperscaffold91037500 Alkaloid BBE medium borderline
Hhamunanchor301062560 Alkaloid BBE low borderline