PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold10003880 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold100067700 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold100073660 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
HhamSuperscaffold10013780 Phenylpropanoid CAD low borderline CAD__00016__sp_Q9SJ10_CADH3_ARATH
HhamSuperscaffold10037750 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold110076330 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold110078590 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold110087190 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
HhamSuperscaffold110088180 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
HhamSuperscaffold110092550 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold110093000 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
HhamSuperscaffold110093010 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
HhamSuperscaffold110096130 Phenylpropanoid CAD low borderline CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
HhamSuperscaffold110096140 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
HhamSuperscaffold120100800 Phenylpropanoid CAD low borderline CAD__00010__sp_P48523_CADH4_ARATH
HhamSuperscaffold120116790 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
HhamSuperscaffold120117860 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold120123770 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold130143840 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
HhamSuperscaffold130144840 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold130151450 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold140159580 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold140163360 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold140176540 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
HhamSuperscaffold150179170 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
HhamSuperscaffold150188490 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
HhamSuperscaffold150188500 Phenylpropanoid CAD medium pass CAD__00001__sp_A0A072VPZ8_CAD1_MEDTR
HhamSuperscaffold150193320 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold150196360 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold160210560 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
HhamSuperscaffold170224230 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
HhamSuperscaffold170225550 Phenylpropanoid CAD low borderline CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
HhamSuperscaffold170228170 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
HhamSuperscaffold170239670 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold170239700 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold180245810 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold180251290 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold180251300 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold180258580 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold180266980 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold180267470 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold180268690 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
HhamSuperscaffold190272660 Phenylpropanoid CAD low borderline CAD__00010__sp_P48523_CADH4_ARATH
HhamSuperscaffold200350490 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold20293560 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
HhamSuperscaffold20293570 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
HhamSuperscaffold20293740 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
HhamSuperscaffold20298360 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
HhamSuperscaffold20304690 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
HhamSuperscaffold20304990 Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA