PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
Reset
Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold10006680 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
HhamSuperscaffold100071550 Steroid CAS medium pass CAS__00008__sp_Q6BE25_CAS1_CUCPE
HhamSuperscaffold10024340 Steroid CAS low borderline CAS__00011__sp_Q8W3Z4_CAS1_BETPL
HhamSuperscaffold10037460 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
HhamSuperscaffold10037470 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
HhamSuperscaffold10037750 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold110076330 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold110078590 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold110092540 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold110092550 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold120106870 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold130134420 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold140161010 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold140161020 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold140163360 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold150193320 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold170239670 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold170239700 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold180248450 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
HhamSuperscaffold180251290 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold180251300 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold180258580 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold180266350 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold190288240 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
HhamSuperscaffold190288250 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
HhamSuperscaffold190288260 Steroid CAS medium pass CAS__00013__sp_Q9SLP9_CAS1_LUFAE
HhamSuperscaffold190288270 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
HhamSuperscaffold190288280 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
HhamSuperscaffold190288300 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
HhamSuperscaffold190288310 Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
HhamSuperscaffold190288320 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
HhamSuperscaffold190288330 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
HhamSuperscaffold190288340 Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
HhamSuperscaffold190288350 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
HhamSuperscaffold200350490 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold200350510 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold20298360 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold210353180 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
HhamSuperscaffold210353190 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
HhamSuperscaffold220371610 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
HhamSuperscaffold220379470 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
HhamSuperscaffold220382770 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold220385110 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold220386900 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold220386920 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold230395950 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold230398240 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold230410810 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold240424410 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold240426260 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA