PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
Reset
Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold380720370 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold380727640 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold380727650 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold390744730 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold390744750 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold390747510 Steroid CAS low borderline CAS__00005__sp_P38605_CAS1_ARATH
HhamSuperscaffold390747530 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
HhamSuperscaffold400784690 Steroid CAS low borderline CAS__00008__sp_Q6BE25_CAS1_CUCPE
HhamSuperscaffold400789220 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold400800080 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
HhamSuperscaffold40760610 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
HhamSuperscaffold40781620 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold410811780 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold410811800 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold410814050 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
HhamSuperscaffold410814060 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
HhamSuperscaffold420827880 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold420827890 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold430842390 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold430842640 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold430845030 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold430845050 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold440848960 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold440848970 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold450870970 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold460875360 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
HhamSuperscaffold460875400 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
HhamSuperscaffold460887820 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold460887830 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold50892420 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
HhamSuperscaffold50892440 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
HhamSuperscaffold50906850 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold60930180 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
HhamSuperscaffold60933030 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold60948370 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold70961260 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold70973590 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold70974960 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold70974970 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold70980450 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
HhamSuperscaffold70986760 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold70989640 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold70993060 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
HhamSuperscaffold70994780 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
HhamSuperscaffold91039180 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
HhamSuperscaffold91048580 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ