PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
HhamSuperscaffold20333200 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold20333710 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold20333910 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold20333960 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold20333980 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold20333990 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold20334180 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold210352680 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold210364300 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold210369280 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220373080 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220374840 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220375760 Alkaloid CODM/T6ODM medium pass
HhamSuperscaffold220379950 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220382020 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220385720 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220385740 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220385860 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220385970 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220385980 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold220385990 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold230399900 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold230409200 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold230409290 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold230409300 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold230412810 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold240427610 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold240428070 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold250442170 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold250442920 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold250452420 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold250454030 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold250457510 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold250457620 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold260464090 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold260464290 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold260466300 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold260467100 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold270480040 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold270480050 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold270480060 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold270480080 Alkaloid CODM/T6ODM low borderline
HhamSuperscaffold270482420 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold270490930 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold270492740 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold270492750 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold270493910 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold280494880 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold280494920 Alkaloid CODM/T6ODM medium borderline
HhamSuperscaffold280500950 Alkaloid CODM/T6ODM medium borderline