PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold220388280 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold230397860 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold240430240 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold240430280 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold240430290 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold240439600 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold270483610 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold270487950 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold280504560 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold290510900 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold290516550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold300598170 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold30544550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold30546480 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold30554470 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold30575010 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold30577980 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold30579440 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold330647250 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold350681270 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold360687200 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold360687280 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold360689980 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold360693920 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold380727920 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold390735040 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold390744130 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold400785240 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold40758210 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold410802760 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold410811220 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold420824610 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold440859630 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold450865300 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold460886910 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold50897900 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold50913360 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold50915540 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold50920000 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
HhamSuperscaffold60925780 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold60933990 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold60934800 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold60940550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold60955030 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold70973390 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold70994060 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold91027910 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold91034420 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold91036830 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
HhamSuperscaffold91045650 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL