PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP71
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold230409480 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold230409500 Terpenoid CYP71 medium pass CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold240421220 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold240425400 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold240440430 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold240440450 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold250448140 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold250452050 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold250455720 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold250456440 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold260475170 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold270488040 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold270488060 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold270490130 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold270490140 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold270490150 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold280498470 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold280507030 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold290516600 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold290516610 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold300595870 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold30544270 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold30544830 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold30554910 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold30554930 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold30554950 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold30579040 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold30579510 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold30579860 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold320622140 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold320635200 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold330637160 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold330640870 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold330640880 Terpenoid CYP71 medium pass CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold330640890 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold330640900 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold330641280 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold330641350 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold330641360 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold330643170 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold340660880 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold340665890 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold340665900 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold340665910 Terpenoid CYP71 medium pass CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold340665930 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold360696040 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold370709240 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold380715790 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
HhamSuperscaffold380716890 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
HhamSuperscaffold380719550 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO