PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
HhamSuperscaffold160216170 Flavonoid F3H medium borderline
HhamSuperscaffold160216190 Flavonoid F3H medium borderline
HhamSuperscaffold160218340 Flavonoid F3H medium borderline
HhamSuperscaffold170220680 Flavonoid F3H medium borderline
HhamSuperscaffold170223930 Flavonoid F3H medium borderline
HhamSuperscaffold170223950 Flavonoid F3H low borderline
HhamSuperscaffold170224770 Flavonoid F3H medium borderline
HhamSuperscaffold170226440 Flavonoid F3H medium borderline
HhamSuperscaffold180254540 Flavonoid F3H medium borderline
HhamSuperscaffold180260700 Flavonoid F3H medium borderline
HhamSuperscaffold180260710 Flavonoid F3H medium borderline
HhamSuperscaffold180260720 Flavonoid F3H medium borderline
HhamSuperscaffold180261360 Flavonoid F3H medium borderline
HhamSuperscaffold190274440 Flavonoid F3H medium borderline
HhamSuperscaffold190276370 Flavonoid F3H low borderline
HhamSuperscaffold190276390 Flavonoid F3H medium borderline
HhamSuperscaffold190289080 Flavonoid F3H medium borderline
HhamSuperscaffold200335990 Flavonoid F3H medium borderline
HhamSuperscaffold200340550 Flavonoid F3H medium borderline
HhamSuperscaffold200342050 Flavonoid F3H medium borderline
HhamSuperscaffold200347020 Flavonoid F3H medium borderline
HhamSuperscaffold200349250 Flavonoid F3H medium borderline
HhamSuperscaffold200350590 Flavonoid F3H medium borderline
HhamSuperscaffold200351270 Flavonoid F3H low borderline
HhamSuperscaffold20291120 Flavonoid F3H medium borderline
HhamSuperscaffold20296280 Flavonoid F3H low borderline
HhamSuperscaffold20297730 Flavonoid F3H low borderline
HhamSuperscaffold20300780 Flavonoid F3H medium borderline
HhamSuperscaffold20301500 Flavonoid F3H medium borderline
HhamSuperscaffold20304390 Flavonoid F3H medium borderline
HhamSuperscaffold20305590 Flavonoid F3H medium borderline
HhamSuperscaffold20306550 Flavonoid F3H medium borderline
HhamSuperscaffold20308610 Flavonoid F3H medium pass
HhamSuperscaffold20314270 Flavonoid F3H medium borderline
HhamSuperscaffold20317510 Flavonoid F3H low borderline
HhamSuperscaffold20318320 Flavonoid F3H low borderline
HhamSuperscaffold20333200 Flavonoid F3H medium borderline
HhamSuperscaffold20333710 Flavonoid F3H medium borderline
HhamSuperscaffold20333910 Flavonoid F3H medium borderline
HhamSuperscaffold20333960 Flavonoid F3H medium borderline
HhamSuperscaffold20333970 Flavonoid F3H medium borderline
HhamSuperscaffold20333980 Flavonoid F3H medium borderline
HhamSuperscaffold20333990 Flavonoid F3H medium borderline
HhamSuperscaffold20334180 Flavonoid F3H medium borderline
HhamSuperscaffold210364290 Flavonoid F3H medium pass
HhamSuperscaffold210366520 Flavonoid F3H medium borderline
HhamSuperscaffold210367640 Flavonoid F3H medium borderline
HhamSuperscaffold210369250 Flavonoid F3H medium borderline
HhamSuperscaffold210369260 Flavonoid F3H medium borderline
HhamSuperscaffold210369280 Flavonoid F3H medium borderline