PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
HhamSuperscaffold220372220 Flavonoid F3H medium pass
HhamSuperscaffold220372910 Flavonoid F3H medium borderline
HhamSuperscaffold220373080 Flavonoid F3H medium borderline
HhamSuperscaffold220374050 Flavonoid F3H medium pass
HhamSuperscaffold220374840 Flavonoid F3H medium borderline
HhamSuperscaffold220375770 Flavonoid F3H medium borderline
HhamSuperscaffold220378830 Flavonoid F3H medium borderline
HhamSuperscaffold220379950 Flavonoid F3H medium borderline
HhamSuperscaffold220382020 Flavonoid F3H medium borderline
HhamSuperscaffold220385720 Flavonoid F3H medium pass
HhamSuperscaffold220385740 Flavonoid F3H medium borderline
HhamSuperscaffold220385860 Flavonoid F3H low borderline
HhamSuperscaffold220385970 Flavonoid F3H medium borderline
HhamSuperscaffold220385980 Flavonoid F3H medium borderline
HhamSuperscaffold220385990 Flavonoid F3H medium borderline
HhamSuperscaffold220388640 Flavonoid F3H low borderline
HhamSuperscaffold220389040 Flavonoid F3H low borderline
HhamSuperscaffold220389050 Flavonoid F3H low borderline
HhamSuperscaffold220389060 Flavonoid F3H low borderline
HhamSuperscaffold220389100 Flavonoid F3H low borderline
HhamSuperscaffold230390650 Flavonoid F3H low borderline
HhamSuperscaffold230398710 Flavonoid F3H medium borderline
HhamSuperscaffold230399900 Flavonoid F3H medium borderline
HhamSuperscaffold230403970 Flavonoid F3H medium borderline
HhamSuperscaffold230405890 Flavonoid F3H medium borderline
HhamSuperscaffold230409200 Flavonoid F3H medium pass
HhamSuperscaffold230409300 Flavonoid F3H medium borderline
HhamSuperscaffold230412550 Flavonoid F3H medium borderline
HhamSuperscaffold230415190 Flavonoid F3H medium borderline
HhamSuperscaffold240416430 Flavonoid F3H medium pass
HhamSuperscaffold240420440 Flavonoid F3H medium pass
HhamSuperscaffold240425150 Flavonoid F3H medium borderline
HhamSuperscaffold240426590 Flavonoid F3H medium borderline
HhamSuperscaffold240427610 Flavonoid F3H medium borderline
HhamSuperscaffold240428070 Flavonoid F3H medium borderline
HhamSuperscaffold240436070 Flavonoid F3H medium borderline
HhamSuperscaffold240436080 Flavonoid F3H medium borderline
HhamSuperscaffold250442080 Flavonoid F3H medium borderline
HhamSuperscaffold250442170 Flavonoid F3H medium borderline
HhamSuperscaffold250442920 Flavonoid F3H medium borderline
HhamSuperscaffold250449500 Flavonoid F3H medium borderline
HhamSuperscaffold250449510 Flavonoid F3H medium borderline
HhamSuperscaffold250450310 Flavonoid F3H medium borderline
HhamSuperscaffold250450320 Flavonoid F3H medium borderline
HhamSuperscaffold250452420 Flavonoid F3H medium borderline
HhamSuperscaffold250454030 Flavonoid F3H medium borderline
HhamSuperscaffold250457620 Flavonoid F3H medium borderline
HhamSuperscaffold260462120 Flavonoid F3H low borderline
HhamSuperscaffold260464090 Flavonoid F3H medium borderline
HhamSuperscaffold260466300 Flavonoid F3H medium borderline