PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
HhamSuperscaffold260466310 Flavonoid F3H low borderline
HhamSuperscaffold260473070 Flavonoid F3H medium borderline
HhamSuperscaffold270480030 Flavonoid F3H low borderline
HhamSuperscaffold270480070 Flavonoid F3H medium borderline
HhamSuperscaffold270482420 Flavonoid F3H medium borderline
HhamSuperscaffold270490930 Flavonoid F3H medium borderline
HhamSuperscaffold270492740 Flavonoid F3H medium borderline
HhamSuperscaffold270492750 Flavonoid F3H medium borderline
HhamSuperscaffold270493910 Flavonoid F3H medium borderline
HhamSuperscaffold280494880 Flavonoid F3H medium borderline
HhamSuperscaffold280494920 Flavonoid F3H medium borderline
HhamSuperscaffold280500950 Flavonoid F3H medium borderline
HhamSuperscaffold280508270 Flavonoid F3H medium pass
HhamSuperscaffold290515710 Flavonoid F3H medium pass
HhamSuperscaffold290526110 Flavonoid F3H medium borderline
HhamSuperscaffold300585050 Flavonoid F3H medium borderline
HhamSuperscaffold300588000 Flavonoid F3H medium borderline
HhamSuperscaffold300598000 Flavonoid F3H medium borderline
HhamSuperscaffold300598060 Flavonoid F3H medium borderline
HhamSuperscaffold30542450 Flavonoid F3H medium borderline
HhamSuperscaffold30542460 Flavonoid F3H medium borderline
HhamSuperscaffold30542470 Flavonoid F3H medium borderline
HhamSuperscaffold30543480 Flavonoid F3H medium borderline
HhamSuperscaffold30557610 Flavonoid F3H medium borderline
HhamSuperscaffold30560550 Flavonoid F3H medium borderline
HhamSuperscaffold30569750 Flavonoid F3H medium borderline
HhamSuperscaffold30570080 Flavonoid F3H medium borderline
HhamSuperscaffold30570920 Flavonoid F3H medium borderline
HhamSuperscaffold30572560 Flavonoid F3H medium pass
HhamSuperscaffold30572570 Flavonoid F3H low borderline
HhamSuperscaffold30572580 Flavonoid F3H low borderline
HhamSuperscaffold30572590 Flavonoid F3H low borderline
HhamSuperscaffold30572600 Flavonoid F3H medium pass
HhamSuperscaffold30578150 Flavonoid F3H medium borderline
HhamSuperscaffold30579070 Flavonoid F3H medium borderline
HhamSuperscaffold30582030 Flavonoid F3H medium borderline
HhamSuperscaffold310603580 Flavonoid F3H medium borderline
HhamSuperscaffold310605730 Flavonoid F3H medium borderline
HhamSuperscaffold310609320 Flavonoid F3H low borderline
HhamSuperscaffold310609330 Flavonoid F3H low borderline
HhamSuperscaffold310612860 Flavonoid F3H medium borderline
HhamSuperscaffold310612930 Flavonoid F3H medium borderline
HhamSuperscaffold320619990 Flavonoid F3H medium borderline
HhamSuperscaffold320621020 Flavonoid F3H medium borderline
HhamSuperscaffold320621900 Flavonoid F3H low borderline
HhamSuperscaffold320624380 Flavonoid F3H medium borderline
HhamSuperscaffold320624550 Flavonoid F3H medium borderline
HhamSuperscaffold320628660 Flavonoid F3H medium borderline
HhamSuperscaffold320633220 Flavonoid F3H medium borderline
HhamSuperscaffold320633230 Flavonoid F3H medium borderline