PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold10037750 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold110076330 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold110078500 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold110078590 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold110092540 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold110092550 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold120106870 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold130134420 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold140163360 Alkaloid GES low borderline GES__00010__sp_Q93YV0_GES_ARATH
HhamSuperscaffold150193320 Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
HhamSuperscaffold170239670 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold170239700 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold180251290 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
HhamSuperscaffold180251300 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
HhamSuperscaffold180258580 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold200350490 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold200350510 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold20298360 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold220385100 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold220385110 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold230398240 Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
HhamSuperscaffold240426260 Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
HhamSuperscaffold240430700 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold240430730 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold240430750 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold250443030 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold250455700 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold250455710 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
HhamSuperscaffold250456920 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold250456930 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold250456940 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold260464400 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold270489440 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
HhamSuperscaffold270489660 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold270489710 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold270491070 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold290519470 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold300588630 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold310603280 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold310616590 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold310616600 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold310616610 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold310616620 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold310616630 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold310616660 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold310616670 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold310616680 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold310616690 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold310616710 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold330640020 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU