PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold330640030 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold330642820 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold330642830 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold350672090 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold350672110 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold350672140 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold350672150 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold350672170 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold350672190 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold350672210 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold350672240 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold350674980 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold360683790 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold360683810 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold360683820 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
HhamSuperscaffold380717750 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold380717770 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold380718910 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
HhamSuperscaffold380718920 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold380718930 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold380720370 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
HhamSuperscaffold380727640 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold380727650 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold390744730 Alkaloid GES low borderline GES__00003__sp_C0KWV6_GRNL7_PERFR
HhamSuperscaffold390744750 Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
HhamSuperscaffold40781620 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold410811780 Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
HhamSuperscaffold420816750 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold420817120 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold420827880 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold420827890 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold430842390 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
HhamSuperscaffold430842640 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold430844100 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold430845030 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold430845050 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold440848960 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
HhamSuperscaffold440848970 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
HhamSuperscaffold460887820 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
HhamSuperscaffold460887830 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold60933030 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
HhamSuperscaffold60938780 Alkaloid GES low borderline GES__00010__sp_Q93YV0_GES_ARATH
HhamSuperscaffold70972090 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
HhamSuperscaffold70973590 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
HhamSuperscaffold70974940 Alkaloid GES medium borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold70974960 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold70974970 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
HhamSuperscaffold91039180 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Hhamunanchor5851068600 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU