PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
HhamSuperscaffold100073660 Alkaloid GS medium pass
HhamSuperscaffold110087190 Alkaloid GS high pass
HhamSuperscaffold110088180 Alkaloid GS medium pass
HhamSuperscaffold110093000 Alkaloid GS high pass
HhamSuperscaffold110093010 Alkaloid GS high pass
HhamSuperscaffold110096130 Alkaloid GS low borderline
HhamSuperscaffold110096140 Alkaloid GS low borderline
HhamSuperscaffold110096150 Alkaloid GS low borderline
HhamSuperscaffold120100800 Alkaloid GS low borderline
HhamSuperscaffold120111180 Alkaloid GS low borderline
HhamSuperscaffold120116790 Alkaloid GS medium pass
HhamSuperscaffold130143840 Alkaloid GS high pass
HhamSuperscaffold140176540 Alkaloid GS high pass
HhamSuperscaffold150179170 Alkaloid GS high pass
HhamSuperscaffold150181930 Alkaloid GS low borderline
HhamSuperscaffold150188490 Alkaloid GS high pass
HhamSuperscaffold150188500 Alkaloid GS medium pass
HhamSuperscaffold160214190 Alkaloid GS low borderline
HhamSuperscaffold170225550 Alkaloid GS low borderline
HhamSuperscaffold170228170 Alkaloid GS medium pass
HhamSuperscaffold180253070 Alkaloid GS low borderline
HhamSuperscaffold180258830 Alkaloid GS low borderline
HhamSuperscaffold190272660 Alkaloid GS low borderline
HhamSuperscaffold20304990 Alkaloid GS low borderline
HhamSuperscaffold20305010 Alkaloid GS low borderline
HhamSuperscaffold20307880 Alkaloid GS high pass
HhamSuperscaffold20333230 Alkaloid GS low borderline
HhamSuperscaffold210358670 Alkaloid GS high pass
HhamSuperscaffold210360160 Alkaloid GS low borderline
HhamSuperscaffold210365070 Alkaloid GS high pass
HhamSuperscaffold210368570 Alkaloid GS low borderline
HhamSuperscaffold220375360 Alkaloid GS low borderline
HhamSuperscaffold250442840 Alkaloid GS low borderline
HhamSuperscaffold250449920 Alkaloid GS low borderline
HhamSuperscaffold250449930 Alkaloid GS low borderline
HhamSuperscaffold270491880 Alkaloid GS low borderline
HhamSuperscaffold290511010 Alkaloid GS high pass
HhamSuperscaffold290513840 Alkaloid GS low borderline
HhamSuperscaffold290515770 Alkaloid GS low borderline
HhamSuperscaffold30541720 Alkaloid GS low borderline
HhamSuperscaffold30545090 Alkaloid GS high pass
HhamSuperscaffold30545300 Alkaloid GS high pass
HhamSuperscaffold30550850 Alkaloid GS high pass
HhamSuperscaffold30554030 Alkaloid GS high pass
HhamSuperscaffold30560420 Alkaloid GS high pass
HhamSuperscaffold310601850 Alkaloid GS low borderline
HhamSuperscaffold310603820 Alkaloid GS low borderline
HhamSuperscaffold340659060 Alkaloid GS low borderline
HhamSuperscaffold400793260 Alkaloid GS low borderline
HhamSuperscaffold400798560 Alkaloid GS low borderline