PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
HhamSuperscaffold400798570 Alkaloid GS low borderline
HhamSuperscaffold40752010 Alkaloid GS medium pass
HhamSuperscaffold40755330 Alkaloid GS high pass
HhamSuperscaffold410808380 Alkaloid GS high pass
HhamSuperscaffold420815780 Alkaloid GS low borderline
HhamSuperscaffold420817500 Alkaloid GS high pass
HhamSuperscaffold420825060 Alkaloid GS high pass
HhamSuperscaffold430845070 Alkaloid GS low borderline
HhamSuperscaffold460881990 Alkaloid GS medium pass
HhamSuperscaffold60933730 Alkaloid GS high pass
HhamSuperscaffold60934650 Alkaloid GS low borderline
HhamSuperscaffold60945070 Alkaloid GS high pass
HhamSuperscaffold60945080 Alkaloid GS high pass
HhamSuperscaffold60950240 Alkaloid GS medium pass
HhamSuperscaffold70975640 Alkaloid GS low borderline
HhamSuperscaffold70978280 Alkaloid GS medium pass
HhamSuperscaffold91028030 Alkaloid GS medium pass
HhamSuperscaffold91030750 Alkaloid GS low borderline
HhamSuperscaffold91033410 Alkaloid GS low borderline
HhamSuperscaffold91045260 Alkaloid GS high pass
Hhamunanchor9251072430 Alkaloid GS low borderline