PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
HhamSuperscaffold100057620 Alkaloid H6H low borderline
HhamSuperscaffold100064400 Alkaloid H6H medium borderline
HhamSuperscaffold100072520 Alkaloid H6H medium borderline
HhamSuperscaffold10007830 Alkaloid H6H low borderline
HhamSuperscaffold10030510 Alkaloid H6H low borderline
HhamSuperscaffold10030520 Alkaloid H6H low borderline
HhamSuperscaffold10030530 Alkaloid H6H low borderline
HhamSuperscaffold10030540 Alkaloid H6H low borderline
HhamSuperscaffold10030550 Alkaloid H6H low borderline
HhamSuperscaffold10032500 Alkaloid H6H low borderline
HhamSuperscaffold10044450 Alkaloid H6H low borderline
HhamSuperscaffold10044470 Alkaloid H6H low borderline
HhamSuperscaffold10045240 Alkaloid H6H low borderline
HhamSuperscaffold10045610 Alkaloid H6H low borderline
HhamSuperscaffold110081630 Alkaloid H6H low borderline
HhamSuperscaffold110083240 Alkaloid H6H medium borderline
HhamSuperscaffold110083280 Alkaloid H6H medium borderline
HhamSuperscaffold110095440 Alkaloid H6H low borderline
HhamSuperscaffold110096850 Alkaloid H6H medium borderline
HhamSuperscaffold110096860 Alkaloid H6H medium borderline
HhamSuperscaffold110096870 Alkaloid H6H medium pass
HhamSuperscaffold110097250 Alkaloid H6H low borderline
HhamSuperscaffold120104760 Alkaloid H6H medium pass
HhamSuperscaffold120113610 Alkaloid H6H medium borderline
HhamSuperscaffold120117470 Alkaloid H6H medium borderline
HhamSuperscaffold120119890 Alkaloid H6H low borderline
HhamSuperscaffold130140340 Alkaloid H6H medium pass
HhamSuperscaffold130140740 Alkaloid H6H medium borderline
HhamSuperscaffold130144430 Alkaloid H6H medium borderline
HhamSuperscaffold130147300 Alkaloid H6H low borderline
HhamSuperscaffold140156690 Alkaloid H6H low borderline
HhamSuperscaffold140161880 Alkaloid H6H medium borderline
HhamSuperscaffold140163980 Alkaloid H6H medium borderline
HhamSuperscaffold150199760 Alkaloid H6H low borderline
HhamSuperscaffold160207580 Alkaloid H6H medium borderline
HhamSuperscaffold160216180 Alkaloid H6H low borderline
HhamSuperscaffold170223600 Alkaloid H6H low borderline
HhamSuperscaffold170223930 Alkaloid H6H medium borderline
HhamSuperscaffold170223950 Alkaloid H6H high pass
HhamSuperscaffold170226440 Alkaloid H6H low borderline
HhamSuperscaffold180261350 Alkaloid H6H low borderline
HhamSuperscaffold190274440 Alkaloid H6H high pass
HhamSuperscaffold190276370 Alkaloid H6H medium pass
HhamSuperscaffold200340550 Alkaloid H6H medium borderline
HhamSuperscaffold200347480 Alkaloid H6H low borderline
HhamSuperscaffold200347500 Alkaloid H6H low borderline
HhamSuperscaffold200349250 Alkaloid H6H medium borderline
HhamSuperscaffold20296280 Alkaloid H6H low borderline
HhamSuperscaffold20297730 Alkaloid H6H medium pass
HhamSuperscaffold20301500 Alkaloid H6H medium borderline