PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
HhamSuperscaffold20304360 Alkaloid H6H low borderline
HhamSuperscaffold20304390 Alkaloid H6H low borderline
HhamSuperscaffold20304400 Alkaloid H6H low borderline
HhamSuperscaffold20306550 Alkaloid H6H high pass
HhamSuperscaffold20308610 Alkaloid H6H medium pass
HhamSuperscaffold20321090 Alkaloid H6H low borderline
HhamSuperscaffold20333970 Alkaloid H6H low borderline
HhamSuperscaffold210364290 Alkaloid H6H low borderline
HhamSuperscaffold210366520 Alkaloid H6H high pass
HhamSuperscaffold210369250 Alkaloid H6H medium pass
HhamSuperscaffold210369260 Alkaloid H6H medium borderline
HhamSuperscaffold220372220 Alkaloid H6H low borderline
HhamSuperscaffold220372910 Alkaloid H6H medium borderline
HhamSuperscaffold220375770 Alkaloid H6H medium borderline
HhamSuperscaffold220389040 Alkaloid H6H low borderline
HhamSuperscaffold220389050 Alkaloid H6H low borderline
HhamSuperscaffold220389060 Alkaloid H6H low borderline
HhamSuperscaffold220389070 Alkaloid H6H low borderline
HhamSuperscaffold220389100 Alkaloid H6H low borderline
HhamSuperscaffold220389450 Alkaloid H6H low borderline
HhamSuperscaffold230390650 Alkaloid H6H low borderline
HhamSuperscaffold230398710 Alkaloid H6H medium borderline
HhamSuperscaffold230403970 Alkaloid H6H medium borderline
HhamSuperscaffold230405890 Alkaloid H6H medium borderline
HhamSuperscaffold230406040 Alkaloid H6H low borderline
HhamSuperscaffold230415190 Alkaloid H6H low borderline
HhamSuperscaffold230415200 Alkaloid H6H low borderline
HhamSuperscaffold230415210 Alkaloid H6H low borderline
HhamSuperscaffold240416430 Alkaloid H6H medium pass
HhamSuperscaffold240426590 Alkaloid H6H medium borderline
HhamSuperscaffold240431970 Alkaloid H6H low borderline
HhamSuperscaffold240436070 Alkaloid H6H medium borderline
HhamSuperscaffold240436080 Alkaloid H6H medium borderline
HhamSuperscaffold250442080 Alkaloid H6H medium borderline
HhamSuperscaffold250449500 Alkaloid H6H high pass
HhamSuperscaffold250449510 Alkaloid H6H medium borderline
HhamSuperscaffold250450310 Alkaloid H6H low borderline
HhamSuperscaffold250450320 Alkaloid H6H medium borderline
HhamSuperscaffold250454270 Alkaloid H6H low borderline
HhamSuperscaffold260465880 Alkaloid H6H low borderline
HhamSuperscaffold260466310 Alkaloid H6H low borderline
HhamSuperscaffold260467080 Alkaloid H6H low borderline
HhamSuperscaffold260467090 Alkaloid H6H low borderline
HhamSuperscaffold260469110 Alkaloid H6H low borderline
HhamSuperscaffold260469120 Alkaloid H6H low borderline
HhamSuperscaffold260473070 Alkaloid H6H medium borderline
HhamSuperscaffold270480070 Alkaloid H6H low borderline
HhamSuperscaffold300598060 Alkaloid H6H medium borderline
HhamSuperscaffold30543480 Alkaloid H6H high pass
HhamSuperscaffold30560550 Alkaloid H6H medium borderline