PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
Reset
Gene Pathway Family Confidence Status
HhamSuperscaffold30582030 Alkaloid H6H medium borderline
HhamSuperscaffold310609320 Alkaloid H6H low borderline
HhamSuperscaffold310609330 Alkaloid H6H low borderline
HhamSuperscaffold320619990 Alkaloid H6H medium borderline
HhamSuperscaffold320621900 Alkaloid H6H medium pass
HhamSuperscaffold320624380 Alkaloid H6H medium borderline
HhamSuperscaffold320624550 Alkaloid H6H low borderline
HhamSuperscaffold320628660 Alkaloid H6H medium borderline
HhamSuperscaffold320633300 Alkaloid H6H low borderline
HhamSuperscaffold330645560 Alkaloid H6H high pass
HhamSuperscaffold330650590 Alkaloid H6H low borderline
HhamSuperscaffold330650600 Alkaloid H6H low borderline
HhamSuperscaffold330650670 Alkaloid H6H low borderline
HhamSuperscaffold340655020 Alkaloid H6H medium borderline
HhamSuperscaffold340660820 Alkaloid H6H medium borderline
HhamSuperscaffold340660830 Alkaloid H6H medium borderline
HhamSuperscaffold340662790 Alkaloid H6H low borderline
HhamSuperscaffold350678160 Alkaloid H6H medium borderline
HhamSuperscaffold350679450 Alkaloid H6H medium borderline
HhamSuperscaffold360685960 Alkaloid H6H medium borderline
HhamSuperscaffold360693540 Alkaloid H6H low borderline
HhamSuperscaffold360695440 Alkaloid H6H medium borderline
HhamSuperscaffold370699680 Alkaloid H6H low borderline
HhamSuperscaffold370699690 Alkaloid H6H medium borderline
HhamSuperscaffold370699700 Alkaloid H6H medium borderline
HhamSuperscaffold370702150 Alkaloid H6H low borderline
HhamSuperscaffold370706340 Alkaloid H6H medium borderline
HhamSuperscaffold370706350 Alkaloid H6H medium borderline
HhamSuperscaffold370711710 Alkaloid H6H low borderline
HhamSuperscaffold380717040 Alkaloid H6H medium borderline
HhamSuperscaffold380725650 Alkaloid H6H medium borderline
HhamSuperscaffold380729080 Alkaloid H6H medium borderline
HhamSuperscaffold380730990 Alkaloid H6H high pass
HhamSuperscaffold390743720 Alkaloid H6H low borderline
HhamSuperscaffold400784740 Alkaloid H6H low borderline
HhamSuperscaffold400784750 Alkaloid H6H low borderline
HhamSuperscaffold400789880 Alkaloid H6H medium borderline
HhamSuperscaffold400793590 Alkaloid H6H medium borderline
HhamSuperscaffold40765200 Alkaloid H6H medium borderline
HhamSuperscaffold40772780 Alkaloid H6H medium borderline
HhamSuperscaffold40778590 Alkaloid H6H medium borderline
HhamSuperscaffold40782320 Alkaloid H6H low borderline
HhamSuperscaffold410806980 Alkaloid H6H low borderline
HhamSuperscaffold410810910 Alkaloid H6H low borderline
HhamSuperscaffold420828390 Alkaloid H6H low borderline
HhamSuperscaffold420828410 Alkaloid H6H low borderline
HhamSuperscaffold420828420 Alkaloid H6H low borderline
HhamSuperscaffold420828440 Alkaloid H6H low borderline
HhamSuperscaffold430832420 Alkaloid H6H low borderline
HhamSuperscaffold430832430 Alkaloid H6H low borderline