PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
HhamSuperscaffold430842460 Alkaloid H6H low borderline
HhamSuperscaffold430845010 Alkaloid H6H low borderline
HhamSuperscaffold430845580 Alkaloid H6H medium borderline
HhamSuperscaffold430845830 Alkaloid H6H low borderline
HhamSuperscaffold430845980 Alkaloid H6H low borderline
HhamSuperscaffold440850430 Alkaloid H6H low borderline
HhamSuperscaffold440852430 Alkaloid H6H low borderline
HhamSuperscaffold450862970 Alkaloid H6H medium pass
HhamSuperscaffold450870350 Alkaloid H6H medium borderline
HhamSuperscaffold450873350 Alkaloid H6H low borderline
HhamSuperscaffold460883290 Alkaloid H6H low borderline
HhamSuperscaffold460884100 Alkaloid H6H low borderline
HhamSuperscaffold460884540 Alkaloid H6H low borderline
HhamSuperscaffold50900030 Alkaloid H6H low borderline
HhamSuperscaffold50901150 Alkaloid H6H low borderline
HhamSuperscaffold50901160 Alkaloid H6H low borderline
HhamSuperscaffold50903640 Alkaloid H6H medium borderline
HhamSuperscaffold50907830 Alkaloid H6H low borderline
HhamSuperscaffold50912670 Alkaloid H6H medium borderline
HhamSuperscaffold50915580 Alkaloid H6H low borderline
HhamSuperscaffold60924160 Alkaloid H6H low borderline
HhamSuperscaffold60936490 Alkaloid H6H medium pass
HhamSuperscaffold60956380 Alkaloid H6H medium borderline
HhamSuperscaffold60958780 Alkaloid H6H low borderline
HhamSuperscaffold70961900 Alkaloid H6H high pass
HhamSuperscaffold70962620 Alkaloid H6H low borderline
HhamSuperscaffold70970340 Alkaloid H6H medium borderline
HhamSuperscaffold70983040 Alkaloid H6H low borderline
HhamSuperscaffold70984740 Alkaloid H6H medium borderline
HhamSuperscaffold70985490 Alkaloid H6H low borderline
HhamSuperscaffold70987020 Alkaloid H6H medium pass
HhamSuperscaffold70991860 Alkaloid H6H low borderline
HhamSuperscaffold70994720 Alkaloid H6H low borderline
HhamSuperscaffold70994730 Alkaloid H6H low borderline
HhamSuperscaffold70994740 Alkaloid H6H low borderline
HhamSuperscaffold80996560 Alkaloid H6H low borderline
HhamSuperscaffold80996570 Alkaloid H6H low borderline
HhamSuperscaffold80996580 Alkaloid H6H low borderline
HhamSuperscaffold80997080 Alkaloid H6H low borderline
HhamSuperscaffold80997100 Alkaloid H6H low borderline
HhamSuperscaffold81000200 Alkaloid H6H low borderline
HhamSuperscaffold81002030 Alkaloid H6H low borderline
HhamSuperscaffold81002040 Alkaloid H6H low borderline
HhamSuperscaffold81019990 Alkaloid H6H low borderline
Hhamunanchor1401057410 Alkaloid H6H low borderline
Hhamunanchor4771066540 Alkaloid H6H low borderline
Hhamunanchor581068540 Alkaloid H6H medium borderline
Hhamunanchor931072460 Alkaloid H6H medium borderline