PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold10002810 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold10002860 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold10002880 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold100048690 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold100054770 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold100055420 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold100067760 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold10039610 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold110084230 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold110084710 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold110084760 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold120108740 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold120117080 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold130135730 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold130148450 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold130148510 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold130152540 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold130152550 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold130152570 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold140173240 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold160206160 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold170230960 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold170241780 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold180245040 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold180248640 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold190278040 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold200335860 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold200337490 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold200343920 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold200343930 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold200346390 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold220386160 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold220386180 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold220386190 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold230405990 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold240435210 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold240438080 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold240441070 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold250454320 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold250457850 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold250457880 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold260464990 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold260469580 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold260469590 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold260469600 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold260477110 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold260477120 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold260477340 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold290514150 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold290514160 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC