PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold290516490 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold30547970 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold30553180 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold30575500 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold310610220 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold320624490 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold320627090 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold340661290 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold340666030 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold340666040 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold350677610 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold350679990 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold370702930 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold390735120 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold390735130 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold400785570 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold400786770 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold400786780 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold40750630 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold40750640 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold40750650 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold40761520 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold40768810 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold40780870 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold410802830 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold420823870 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold420829650 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold440853150 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold440859990 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold440860010 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold440860020 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold460876210 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold50889440 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold50889450 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold60926720 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold60930280 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold60947750 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold70982070 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold70993720 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold80996670 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold80998480 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold81007110 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold81017910 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold91028620 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold91031100 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
HhamSuperscaffold91045050 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold91048480 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
HhamSuperscaffold91051990 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Hhamunanchor431065370 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Hhamunanchor451065830 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC