PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
HhamSuperscaffold290511300 Flavonoid IFR low borderline
HhamSuperscaffold30543740 Flavonoid IFR medium pass
HhamSuperscaffold30562490 Flavonoid IFR high pass
HhamSuperscaffold310601600 Flavonoid IFR high pass
HhamSuperscaffold320629760 Flavonoid IFR low borderline
HhamSuperscaffold330642720 Flavonoid IFR high pass
HhamSuperscaffold330642730 Flavonoid IFR high pass
HhamSuperscaffold350672450 Flavonoid IFR low borderline
HhamSuperscaffold350682340 Flavonoid IFR high pass
HhamSuperscaffold370708440 Flavonoid IFR low borderline
HhamSuperscaffold380725480 Flavonoid IFR low borderline
HhamSuperscaffold380726420 Flavonoid IFR medium pass
HhamSuperscaffold380728000 Flavonoid IFR medium pass
HhamSuperscaffold380728010 Flavonoid IFR high pass
HhamSuperscaffold380730480 Flavonoid IFR low borderline
HhamSuperscaffold390736480 Flavonoid IFR high pass
HhamSuperscaffold400795740 Flavonoid IFR high pass
HhamSuperscaffold400795940 Flavonoid IFR low borderline
HhamSuperscaffold40749360 Flavonoid IFR high pass
HhamSuperscaffold40758220 Flavonoid IFR low borderline
HhamSuperscaffold40762600 Flavonoid IFR low borderline
HhamSuperscaffold40768360 Flavonoid IFR low borderline
HhamSuperscaffold410811230 Flavonoid IFR low borderline
HhamSuperscaffold420815530 Flavonoid IFR high pass
HhamSuperscaffold420822870 Flavonoid IFR high pass
HhamSuperscaffold430833020 Flavonoid IFR low borderline
HhamSuperscaffold430837920 Flavonoid IFR low borderline
HhamSuperscaffold440857110 Flavonoid IFR low borderline
HhamSuperscaffold450869660 Flavonoid IFR low borderline
HhamSuperscaffold50893040 Flavonoid IFR low borderline
HhamSuperscaffold50902670 Flavonoid IFR low borderline
HhamSuperscaffold50914000 Flavonoid IFR low borderline
HhamSuperscaffold60927120 Flavonoid IFR low borderline
HhamSuperscaffold60928780 Flavonoid IFR low borderline
HhamSuperscaffold60946180 Flavonoid IFR low borderline
HhamSuperscaffold60954900 Flavonoid IFR medium pass
HhamSuperscaffold70965230 Flavonoid IFR low borderline
HhamSuperscaffold70969010 Flavonoid IFR low borderline
HhamSuperscaffold70973030 Flavonoid IFR high pass
HhamSuperscaffold70982730 Flavonoid IFR high pass
HhamSuperscaffold91026740 Flavonoid IFR low borderline
HhamSuperscaffold91028450 Flavonoid IFR low borderline
HhamSuperscaffold91048530 Flavonoid IFR low borderline