PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold30556510 Flavonoid IFS low borderline
HhamSuperscaffold30556660 Flavonoid IFS low borderline
HhamSuperscaffold30556960 Flavonoid IFS medium borderline
HhamSuperscaffold30558320 Flavonoid IFS low borderline
HhamSuperscaffold30559180 Flavonoid IFS medium borderline
HhamSuperscaffold30559310 Flavonoid IFS medium borderline
HhamSuperscaffold30561020 Flavonoid IFS low borderline
HhamSuperscaffold30566540 Flavonoid IFS low borderline
HhamSuperscaffold30566620 Flavonoid IFS low borderline
HhamSuperscaffold30578980 Flavonoid IFS low borderline
HhamSuperscaffold30579510 Flavonoid IFS medium borderline
HhamSuperscaffold30580910 Flavonoid IFS medium borderline
HhamSuperscaffold30583660 Flavonoid IFS low borderline
HhamSuperscaffold30583670 Flavonoid IFS low borderline
HhamSuperscaffold310605310 Flavonoid IFS medium borderline
HhamSuperscaffold310605320 Flavonoid IFS medium borderline
HhamSuperscaffold320622160 Flavonoid IFS medium borderline
HhamSuperscaffold320625990 Flavonoid IFS low borderline
HhamSuperscaffold320629090 Flavonoid IFS medium borderline
HhamSuperscaffold320634200 Flavonoid IFS medium borderline
HhamSuperscaffold320634760 Flavonoid IFS low borderline
HhamSuperscaffold320634780 Flavonoid IFS medium borderline
HhamSuperscaffold320634790 Flavonoid IFS medium borderline
HhamSuperscaffold320634810 Flavonoid IFS medium borderline
HhamSuperscaffold330638340 Flavonoid IFS medium borderline
HhamSuperscaffold330641280 Flavonoid IFS medium borderline
HhamSuperscaffold330641360 Flavonoid IFS medium borderline
HhamSuperscaffold330644470 Flavonoid IFS medium borderline
HhamSuperscaffold330647560 Flavonoid IFS medium borderline
HhamSuperscaffold330651240 Flavonoid IFS low borderline
HhamSuperscaffold330651740 Flavonoid IFS low borderline
HhamSuperscaffold330651750 Flavonoid IFS low borderline
HhamSuperscaffold330651760 Flavonoid IFS low borderline
HhamSuperscaffold330651800 Flavonoid IFS low borderline
HhamSuperscaffold330651830 Flavonoid IFS low borderline
HhamSuperscaffold330651840 Flavonoid IFS low borderline
HhamSuperscaffold340653970 Flavonoid IFS low borderline
HhamSuperscaffold340657410 Flavonoid IFS low borderline
HhamSuperscaffold340659820 Flavonoid IFS medium borderline
HhamSuperscaffold340660440 Flavonoid IFS medium pass
HhamSuperscaffold350682400 Flavonoid IFS medium borderline
HhamSuperscaffold350682420 Flavonoid IFS low borderline
HhamSuperscaffold350682430 Flavonoid IFS medium borderline
HhamSuperscaffold360685180 Flavonoid IFS low borderline
HhamSuperscaffold360687720 Flavonoid IFS low borderline
HhamSuperscaffold360691120 Flavonoid IFS medium borderline
HhamSuperscaffold370701430 Flavonoid IFS medium borderline
HhamSuperscaffold370701450 Flavonoid IFS medium borderline
HhamSuperscaffold370701470 Flavonoid IFS medium borderline
HhamSuperscaffold370705130 Flavonoid IFS medium borderline