PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
HhamSuperscaffold100056020 Alkaloid IO medium borderline
HhamSuperscaffold100056380 Alkaloid IO medium borderline
HhamSuperscaffold10006320 Alkaloid IO medium pass
HhamSuperscaffold100067710 Alkaloid IO medium pass
HhamSuperscaffold10008860 Alkaloid IO low borderline
HhamSuperscaffold110075760 Alkaloid IO medium borderline
HhamSuperscaffold110099880 Alkaloid IO medium borderline
HhamSuperscaffold120111030 Alkaloid IO medium pass
HhamSuperscaffold120116060 Alkaloid IO medium borderline
HhamSuperscaffold120123910 Alkaloid IO medium borderline
HhamSuperscaffold130139080 Alkaloid IO low borderline
HhamSuperscaffold130151590 Alkaloid IO medium borderline
HhamSuperscaffold140161700 Alkaloid IO medium borderline
HhamSuperscaffold140174710 Alkaloid IO medium borderline
HhamSuperscaffold150181060 Alkaloid IO medium borderline
HhamSuperscaffold170225160 Alkaloid IO medium borderline
HhamSuperscaffold170225220 Alkaloid IO medium pass
HhamSuperscaffold170227510 Alkaloid IO medium borderline
HhamSuperscaffold170234160 Alkaloid IO medium borderline
HhamSuperscaffold170241340 Alkaloid IO medium borderline
HhamSuperscaffold170241380 Alkaloid IO medium borderline
HhamSuperscaffold180244440 Alkaloid IO medium borderline
HhamSuperscaffold180256770 Alkaloid IO low borderline
HhamSuperscaffold190270300 Alkaloid IO medium borderline
HhamSuperscaffold190274780 Alkaloid IO medium borderline
HhamSuperscaffold190276090 Alkaloid IO medium borderline
HhamSuperscaffold190281180 Alkaloid IO medium borderline
HhamSuperscaffold200336690 Alkaloid IO medium borderline
HhamSuperscaffold200346370 Alkaloid IO low borderline
HhamSuperscaffold20298320 Alkaloid IO low borderline
HhamSuperscaffold20324370 Alkaloid IO medium borderline
HhamSuperscaffold220373650 Alkaloid IO medium borderline
HhamSuperscaffold230390960 Alkaloid IO medium borderline
HhamSuperscaffold230401660 Alkaloid IO medium borderline
HhamSuperscaffold240418420 Alkaloid IO medium borderline
HhamSuperscaffold240419350 Alkaloid IO medium borderline
HhamSuperscaffold240428770 Alkaloid IO medium borderline
HhamSuperscaffold240436370 Alkaloid IO medium borderline
HhamSuperscaffold260463110 Alkaloid IO medium borderline
HhamSuperscaffold270481960 Alkaloid IO medium borderline
HhamSuperscaffold270486370 Alkaloid IO medium borderline
HhamSuperscaffold290531710 Alkaloid IO medium pass
HhamSuperscaffold30542040 Alkaloid IO medium pass
HhamSuperscaffold30542580 Alkaloid IO low borderline
HhamSuperscaffold30544090 Alkaloid IO medium borderline
HhamSuperscaffold30550660 Alkaloid IO medium borderline
HhamSuperscaffold30566540 Alkaloid IO medium borderline
HhamSuperscaffold30570660 Alkaloid IO medium pass
HhamSuperscaffold310605310 Alkaloid IO medium borderline
HhamSuperscaffold310618760 Alkaloid IO medium borderline