PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
HhamSuperscaffold320622160 Alkaloid IO medium borderline
HhamSuperscaffold330638660 Alkaloid IO low borderline
HhamSuperscaffold340657790 Alkaloid IO medium borderline
HhamSuperscaffold360685180 Alkaloid IO low borderline
HhamSuperscaffold360697940 Alkaloid IO low borderline
HhamSuperscaffold370701460 Alkaloid IO medium borderline
HhamSuperscaffold370705130 Alkaloid IO medium borderline
HhamSuperscaffold380724540 Alkaloid IO medium borderline
HhamSuperscaffold390733650 Alkaloid IO low borderline
HhamSuperscaffold390734370 Alkaloid IO medium borderline
HhamSuperscaffold400794390 Alkaloid IO medium borderline
HhamSuperscaffold400798830 Alkaloid IO medium borderline
HhamSuperscaffold40749980 Alkaloid IO medium borderline
HhamSuperscaffold40751100 Alkaloid IO medium borderline
HhamSuperscaffold40767600 Alkaloid IO medium pass
HhamSuperscaffold410802200 Alkaloid IO medium borderline
HhamSuperscaffold410802410 Alkaloid IO low borderline
HhamSuperscaffold430839020 Alkaloid IO medium borderline
HhamSuperscaffold450865400 Alkaloid IO medium borderline
HhamSuperscaffold450870500 Alkaloid IO medium borderline
HhamSuperscaffold460879190 Alkaloid IO medium pass
HhamSuperscaffold50897450 Alkaloid IO low borderline
HhamSuperscaffold50918240 Alkaloid IO medium borderline
HhamSuperscaffold60946060 Alkaloid IO low borderline
HhamSuperscaffold70960970 Alkaloid IO low borderline
HhamSuperscaffold70984020 Alkaloid IO medium borderline
HhamSuperscaffold80996650 Alkaloid IO medium borderline
HhamSuperscaffold81024020 Alkaloid IO low borderline
HhamSuperscaffold91030030 Alkaloid IO medium borderline
HhamSuperscaffold91040600 Alkaloid IO low borderline
HhamSuperscaffold91049010 Alkaloid IO medium pass
HhamSuperscaffold91052660 Alkaloid IO medium borderline