PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold180247510 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold180247520 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold180256370 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold180256380 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold180256390 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold180257770 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold190276020 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold200335820 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold200336480 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold200345480 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold200345700 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold200345710 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold20292360 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold20299620 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold20301620 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold20320280 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold210364710 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold220389410 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold230396610 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold230401400 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold230401670 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold230404410 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold240428320 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold240428400 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold240428430 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold240437530 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold240437880 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold240437890 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold240437900 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold240437910 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold240437920 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold240437930 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold240438060 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold250452460 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold250452470 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold250452900 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold250452910 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold250460580 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold250460590 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold260467520 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold260476760 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold260476910 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold270481710 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold270485500 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold280499190 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold280504320 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold280504400 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold30566320 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold30573390 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold320625400 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH