PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold320630120 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold330649200 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold340661330 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold340668500 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold340668510 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold340668540 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold350679350 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold350679760 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold350679770 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold350679800 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold350679840 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold350679850 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold360685310 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold360685320 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold360685330 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold360685340 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold370709100 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold370711090 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold380717370 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold380729570 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold400784510 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold400790970 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold400791220 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold400791230 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold40768090 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold40773490 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold40773570 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold40780710 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold40780840 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold420822160 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold420826280 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold420826680 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold440860760 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold440861530 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold450873020 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold460875520 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold460876820 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold460876830 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold460886550 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold460886790 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold50892200 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold50892310 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold50896250 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold50902640 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold50903460 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold50912180 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold50912190 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold50912200 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold50912210 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold60928960 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH