PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold10001020 Alkaloid NMT low borderline NMT__00060__sp_Q9MAT5_ANM10_ARATH
HhamSuperscaffold100073340 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
HhamSuperscaffold100074040 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
HhamSuperscaffold10017630 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold10024960 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold10031430 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold10031490 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
HhamSuperscaffold10036960 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold10042420 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
HhamSuperscaffold10044080 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
HhamSuperscaffold110083310 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold110084520 Alkaloid NMT low borderline NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold110084530 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold110084540 Alkaloid NMT low borderline NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold110089660 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
HhamSuperscaffold110090100 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold110094050 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
HhamSuperscaffold110094060 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
HhamSuperscaffold110098300 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
HhamSuperscaffold110099750 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
HhamSuperscaffold120110740 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold120110750 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold120116890 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold120123740 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold120126450 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
HhamSuperscaffold130132190 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
HhamSuperscaffold130137710 Alkaloid NMT medium pass NMT__00023__sp_O82210_ANM12_ARATH
HhamSuperscaffold130139340 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold130143310 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
HhamSuperscaffold130143970 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold130151390 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold130151410 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold130154750 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
HhamSuperscaffold140164290 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
HhamSuperscaffold140170990 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
HhamSuperscaffold140174670 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold140174750 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold140175280 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
HhamSuperscaffold150180410 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
HhamSuperscaffold150197240 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold150197260 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold150197280 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold160201320 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
HhamSuperscaffold160201790 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
HhamSuperscaffold170222600 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
HhamSuperscaffold170226700 Alkaloid NMT medium borderline NMT__00010__sp_A4GE70_DXMT1_COFCA
HhamSuperscaffold170226980 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
HhamSuperscaffold170231660 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
HhamSuperscaffold170232350 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
HhamSuperscaffold170237270 Alkaloid NMT low borderline NMT__00021__sp_O64827_SUVR5_ARATH