PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold170239860 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
HhamSuperscaffold180243230 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
HhamSuperscaffold180251430 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
HhamSuperscaffold180251900 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold180256860 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold180258280 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
HhamSuperscaffold180268350 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
HhamSuperscaffold190270160 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
HhamSuperscaffold190270920 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
HhamSuperscaffold190270930 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
HhamSuperscaffold190278090 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold190278100 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold190278710 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
HhamSuperscaffold190278800 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
HhamSuperscaffold190279190 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
HhamSuperscaffold20291370 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
HhamSuperscaffold20293500 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
HhamSuperscaffold20294080 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
HhamSuperscaffold20298460 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
HhamSuperscaffold20300770 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold20302490 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
HhamSuperscaffold20310080 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold20310690 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
HhamSuperscaffold20322720 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold20324820 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold20327150 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold20334460 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
HhamSuperscaffold20334840 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
HhamSuperscaffold210357350 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
HhamSuperscaffold210360880 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold210362050 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold210366140 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
HhamSuperscaffold210370850 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
HhamSuperscaffold220372690 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
HhamSuperscaffold220375630 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
HhamSuperscaffold220380070 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold220380080 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold220380100 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold220386080 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
HhamSuperscaffold220389120 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
HhamSuperscaffold230403960 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
HhamSuperscaffold230404110 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold230410450 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold230411920 Alkaloid NMT medium pass NMT__00018__sp_I1M2U5_NAMT1_SOYBN
HhamSuperscaffold230413690 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
HhamSuperscaffold240416200 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
HhamSuperscaffold240419140 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
HhamSuperscaffold240429550 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
HhamSuperscaffold240439410 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
HhamSuperscaffold250442510 Alkaloid NMT low borderline NMT__00019__sp_O22781_SUVH2_ARATH