PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold360683060 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
HhamSuperscaffold360684310 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
HhamSuperscaffold360684710 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
HhamSuperscaffold360695640 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
HhamSuperscaffold360697030 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold360698120 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold370699000 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
HhamSuperscaffold370699360 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
HhamSuperscaffold380716730 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
HhamSuperscaffold380725570 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold380727690 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
HhamSuperscaffold380729120 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
HhamSuperscaffold380732110 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
HhamSuperscaffold390737790 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
HhamSuperscaffold390740770 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold390740780 Alkaloid NMT low borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold400783650 Alkaloid NMT low borderline NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold400786640 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold400791550 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold400794730 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
HhamSuperscaffold400796660 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
HhamSuperscaffold400797470 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
HhamSuperscaffold40751350 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
HhamSuperscaffold40764290 Alkaloid NMT medium borderline NMT__00043__sp_Q8H0D2_DXMT1_COFAR
HhamSuperscaffold40764300 Alkaloid NMT medium borderline NMT__00043__sp_Q8H0D2_DXMT1_COFAR
HhamSuperscaffold40764320 Alkaloid NMT medium borderline NMT__00043__sp_Q8H0D2_DXMT1_COFAR
HhamSuperscaffold40765800 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
HhamSuperscaffold40777620 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
HhamSuperscaffold410805550 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
HhamSuperscaffold410812370 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold420815260 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
HhamSuperscaffold420816640 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
HhamSuperscaffold420817600 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold430835860 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
HhamSuperscaffold430835890 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
HhamSuperscaffold430837960 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold440854250 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
HhamSuperscaffold440856860 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
HhamSuperscaffold450862710 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
HhamSuperscaffold450864230 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold460877200 Alkaloid NMT low borderline NMT__00019__sp_O22781_SUVH2_ARATH
HhamSuperscaffold460880460 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
HhamSuperscaffold460880750 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
HhamSuperscaffold460882640 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
HhamSuperscaffold460882650 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
HhamSuperscaffold460882660 Alkaloid NMT low borderline NMT__00025__sp_P93831_CLF_ARATH
HhamSuperscaffold460882680 Alkaloid NMT medium pass NMT__00034__sp_Q5VN06_CLF_ORYSJ
HhamSuperscaffold50890470 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
HhamSuperscaffold50892860 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold50892870 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR