PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
HhamSuperscaffold50892880 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold50892890 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold50892910 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
HhamSuperscaffold50894330 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold50894590 Alkaloid NMT medium borderline NMT__00018__sp_I1M2U5_NAMT1_SOYBN
HhamSuperscaffold50908120 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
HhamSuperscaffold50908780 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
HhamSuperscaffold50911040 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
HhamSuperscaffold50911450 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
HhamSuperscaffold50921290 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
HhamSuperscaffold50922630 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold60937350 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold60940450 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
HhamSuperscaffold60944970 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold60949560 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
HhamSuperscaffold60953380 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
HhamSuperscaffold70962530 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
HhamSuperscaffold70969800 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
HhamSuperscaffold70977380 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
HhamSuperscaffold70979020 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
HhamSuperscaffold70979210 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
HhamSuperscaffold70981420 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold70984800 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
HhamSuperscaffold70987130 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold70987140 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold70987920 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold81000910 Alkaloid NMT low borderline NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
HhamSuperscaffold81005130 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
HhamSuperscaffold81008370 Alkaloid NMT low borderline NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold81008980 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
HhamSuperscaffold81012340 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
HhamSuperscaffold81015860 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold81016640 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold81016650 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold81017350 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
HhamSuperscaffold81022320 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
HhamSuperscaffold81022330 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
HhamSuperscaffold91029370 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
HhamSuperscaffold91032550 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
HhamSuperscaffold91034050 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold91040900 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold91053960 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
Hhamunanchor4171064980 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH