PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
HhamSuperscaffold370699770 Alkaloid PYKS low borderline
HhamSuperscaffold370701350 Alkaloid PYKS low borderline
HhamSuperscaffold380728020 Alkaloid PYKS low borderline
HhamSuperscaffold390743360 Alkaloid PYKS low borderline
HhamSuperscaffold390746620 Alkaloid PYKS high pass
HhamSuperscaffold390746640 Alkaloid PYKS high pass
HhamSuperscaffold400794340 Alkaloid PYKS low borderline
HhamSuperscaffold400794990 Alkaloid PYKS high pass
HhamSuperscaffold40770350 Alkaloid PYKS low borderline
HhamSuperscaffold40771870 Alkaloid PYKS low borderline
HhamSuperscaffold410810700 Alkaloid PYKS low borderline
HhamSuperscaffold440858070 Alkaloid PYKS low borderline
HhamSuperscaffold450870410 Alkaloid PYKS low borderline
HhamSuperscaffold450874230 Alkaloid PYKS low borderline
HhamSuperscaffold460877590 Alkaloid PYKS low borderline
HhamSuperscaffold460877680 Alkaloid PYKS low borderline
HhamSuperscaffold460879140 Alkaloid PYKS low borderline
HhamSuperscaffold50899140 Alkaloid PYKS low borderline
HhamSuperscaffold50907510 Alkaloid PYKS low borderline
HhamSuperscaffold50911750 Alkaloid PYKS low borderline
HhamSuperscaffold60925130 Alkaloid PYKS low borderline
HhamSuperscaffold60934210 Alkaloid PYKS low borderline
HhamSuperscaffold60939880 Alkaloid PYKS high pass
HhamSuperscaffold60954890 Alkaloid PYKS low borderline
HhamSuperscaffold70977870 Alkaloid PYKS low borderline
HhamSuperscaffold70977880 Alkaloid PYKS low borderline
HhamSuperscaffold70977900 Alkaloid PYKS low borderline
HhamSuperscaffold70991980 Alkaloid PYKS low borderline
HhamSuperscaffold81010880 Alkaloid PYKS low borderline
HhamSuperscaffold81023160 Alkaloid PYKS low borderline
HhamSuperscaffold91027430 Alkaloid PYKS low borderline
HhamSuperscaffold91033360 Alkaloid PYKS low borderline
HhamSuperscaffold91037550 Alkaloid PYKS medium pass