PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold60953970 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold70961140 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
HhamSuperscaffold70964960 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold70979230 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold70980460 Alkaloid STR medium pass STR__00002__sp_P68175_STSY_RAUSE
HhamSuperscaffold70980470 Alkaloid STR medium pass STR__00002__sp_P68175_STSY_RAUSE
HhamSuperscaffold70982820 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold70987810 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold70988320 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold70988480 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold70991400 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold70992610 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold70995830 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold80997140 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold81005220 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold81012500 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold81024160 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold91028670 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold91028690 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold91028700 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold91039250 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold91039930 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
HhamSuperscaffold91047740 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Hhamunanchor1831058740 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Hhamunanchor2551061030 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Hhamunanchor2711061590 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Hhamunanchor2751061690 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Hhamunanchor6041068990 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH