PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
HhamSuperscaffold340665910 Alkaloid T16H medium borderline
HhamSuperscaffold350682430 Alkaloid T16H medium borderline
HhamSuperscaffold380716910 Alkaloid T16H low borderline
HhamSuperscaffold380723390 Alkaloid T16H medium borderline
HhamSuperscaffold390734620 Alkaloid T16H low borderline
HhamSuperscaffold390739380 Alkaloid T16H medium borderline
HhamSuperscaffold400796300 Alkaloid T16H low borderline
HhamSuperscaffold40750730 Alkaloid T16H low borderline
HhamSuperscaffold40756760 Alkaloid T16H medium borderline
HhamSuperscaffold40764330 Alkaloid T16H medium borderline
HhamSuperscaffold420816050 Alkaloid T16H medium borderline
HhamSuperscaffold420819080 Alkaloid T16H medium borderline
HhamSuperscaffold430838950 Alkaloid T16H medium borderline
HhamSuperscaffold430843230 Alkaloid T16H medium borderline
HhamSuperscaffold430843250 Alkaloid T16H medium borderline
HhamSuperscaffold440857920 Alkaloid T16H medium borderline
HhamSuperscaffold440858750 Alkaloid T16H medium borderline
HhamSuperscaffold440858930 Alkaloid T16H medium borderline
HhamSuperscaffold460878330 Alkaloid T16H medium borderline
HhamSuperscaffold460879300 Alkaloid T16H medium borderline
HhamSuperscaffold460880990 Alkaloid T16H medium borderline
HhamSuperscaffold60931120 Alkaloid T16H medium borderline
HhamSuperscaffold60934430 Alkaloid T16H medium borderline
HhamSuperscaffold60945900 Alkaloid T16H medium borderline
HhamSuperscaffold60951900 Alkaloid T16H medium borderline
HhamSuperscaffold70982440 Alkaloid T16H medium borderline
HhamSuperscaffold81007290 Alkaloid T16H medium borderline
HhamSuperscaffold91033200 Alkaloid T16H medium borderline
HhamSuperscaffold91037310 Alkaloid T16H medium borderline
HhamSuperscaffold91045930 Alkaloid T16H low borderline
HhamSuperscaffold91047630 Alkaloid T16H medium borderline
Hhamunanchor10601055400 Alkaloid T16H medium pass
Hhamunanchor2071059640 Alkaloid T16H low borderline