PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
HhamSuperscaffold10003720 Alkaloid T3O medium borderline
HhamSuperscaffold10004940 Alkaloid T3O low borderline
HhamSuperscaffold100049710 Alkaloid T3O medium borderline
HhamSuperscaffold100056010 Alkaloid T3O medium borderline
HhamSuperscaffold100056030 Alkaloid T3O medium borderline
HhamSuperscaffold100061940 Alkaloid T3O medium borderline
HhamSuperscaffold100064800 Alkaloid T3O low borderline
HhamSuperscaffold100064830 Alkaloid T3O medium borderline
HhamSuperscaffold100067470 Alkaloid T3O medium borderline
HhamSuperscaffold100070340 Alkaloid T3O medium pass
HhamSuperscaffold100071530 Alkaloid T3O low borderline
HhamSuperscaffold100073810 Alkaloid T3O medium borderline
HhamSuperscaffold10012180 Alkaloid T3O medium borderline
HhamSuperscaffold10013000 Alkaloid T3O medium borderline
HhamSuperscaffold10015800 Alkaloid T3O medium borderline
HhamSuperscaffold10015810 Alkaloid T3O medium borderline
HhamSuperscaffold10015820 Alkaloid T3O medium borderline
HhamSuperscaffold10015960 Alkaloid T3O medium pass
HhamSuperscaffold10023580 Alkaloid T3O medium pass
HhamSuperscaffold10024270 Alkaloid T3O medium pass
HhamSuperscaffold10031880 Alkaloid T3O medium pass
HhamSuperscaffold10032000 Alkaloid T3O medium pass
HhamSuperscaffold10033900 Alkaloid T3O medium borderline
HhamSuperscaffold10033940 Alkaloid T3O medium borderline
HhamSuperscaffold10040610 Alkaloid T3O medium borderline
HhamSuperscaffold10040620 Alkaloid T3O medium pass
HhamSuperscaffold10040790 Alkaloid T3O low borderline
HhamSuperscaffold10042630 Alkaloid T3O medium borderline
HhamSuperscaffold10044460 Alkaloid T3O medium borderline
HhamSuperscaffold10044490 Alkaloid T3O medium borderline
HhamSuperscaffold10046110 Alkaloid T3O medium borderline
HhamSuperscaffold110085240 Alkaloid T3O low borderline
HhamSuperscaffold110086220 Alkaloid T3O low borderline
HhamSuperscaffold110087450 Alkaloid T3O medium borderline
HhamSuperscaffold110089470 Alkaloid T3O medium pass
HhamSuperscaffold110093450 Alkaloid T3O medium borderline
HhamSuperscaffold110095360 Alkaloid T3O medium pass
HhamSuperscaffold120100320 Alkaloid T3O low borderline
HhamSuperscaffold120100720 Alkaloid T3O low borderline
HhamSuperscaffold120104070 Alkaloid T3O medium borderline
HhamSuperscaffold120104100 Alkaloid T3O medium borderline
HhamSuperscaffold120104400 Alkaloid T3O medium pass
HhamSuperscaffold120111890 Alkaloid T3O medium borderline
HhamSuperscaffold120115330 Alkaloid T3O medium borderline
HhamSuperscaffold120115400 Alkaloid T3O medium borderline
HhamSuperscaffold120116050 Alkaloid T3O medium borderline
HhamSuperscaffold120118830 Alkaloid T3O low borderline
HhamSuperscaffold130132310 Alkaloid T3O medium borderline
HhamSuperscaffold130132630 Alkaloid T3O medium borderline
HhamSuperscaffold130132640 Alkaloid T3O medium borderline