PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Gene Pathway Family Confidence Status
HhamSuperscaffold130139060 Alkaloid T3O medium borderline
HhamSuperscaffold130142310 Alkaloid T3O medium borderline
HhamSuperscaffold130146050 Alkaloid T3O low borderline
HhamSuperscaffold130148540 Alkaloid T3O medium pass
HhamSuperscaffold130150240 Alkaloid T3O low borderline
HhamSuperscaffold130150590 Alkaloid T3O low borderline
HhamSuperscaffold140155950 Alkaloid T3O medium borderline
HhamSuperscaffold140157820 Alkaloid T3O medium borderline
HhamSuperscaffold140157860 Alkaloid T3O low borderline
HhamSuperscaffold140158240 Alkaloid T3O medium borderline
HhamSuperscaffold140165260 Alkaloid T3O medium pass
HhamSuperscaffold140166450 Alkaloid T3O medium borderline
HhamSuperscaffold140167500 Alkaloid T3O medium borderline
HhamSuperscaffold140168540 Alkaloid T3O medium borderline
HhamSuperscaffold140170700 Alkaloid T3O medium borderline
HhamSuperscaffold140171700 Alkaloid T3O medium borderline
HhamSuperscaffold150184490 Alkaloid T3O medium borderline
HhamSuperscaffold150185850 Alkaloid T3O medium borderline
HhamSuperscaffold150188610 Alkaloid T3O medium pass
HhamSuperscaffold150189130 Alkaloid T3O medium borderline
HhamSuperscaffold150194650 Alkaloid T3O medium borderline
HhamSuperscaffold150198200 Alkaloid T3O medium borderline
HhamSuperscaffold150198570 Alkaloid T3O low borderline
HhamSuperscaffold150200630 Alkaloid T3O medium borderline
HhamSuperscaffold160204020 Alkaloid T3O medium borderline
HhamSuperscaffold160204040 Alkaloid T3O medium borderline
HhamSuperscaffold160204050 Alkaloid T3O medium borderline
HhamSuperscaffold160212270 Alkaloid T3O low borderline
HhamSuperscaffold160212790 Alkaloid T3O medium pass
HhamSuperscaffold160214840 Alkaloid T3O medium pass
HhamSuperscaffold160215050 Alkaloid T3O medium pass
HhamSuperscaffold160215730 Alkaloid T3O low borderline
HhamSuperscaffold160215970 Alkaloid T3O medium borderline
HhamSuperscaffold170225720 Alkaloid T3O medium pass
HhamSuperscaffold170227460 Alkaloid T3O medium borderline
HhamSuperscaffold170227480 Alkaloid T3O medium borderline
HhamSuperscaffold170227530 Alkaloid T3O medium borderline
HhamSuperscaffold170229200 Alkaloid T3O low borderline
HhamSuperscaffold170231910 Alkaloid T3O medium pass
HhamSuperscaffold170239470 Alkaloid T3O medium borderline
HhamSuperscaffold170239720 Alkaloid T3O low borderline
HhamSuperscaffold180246500 Alkaloid T3O low borderline
HhamSuperscaffold180252810 Alkaloid T3O medium borderline
HhamSuperscaffold180252820 Alkaloid T3O medium borderline
HhamSuperscaffold180252830 Alkaloid T3O medium borderline
HhamSuperscaffold180252840 Alkaloid T3O medium borderline
HhamSuperscaffold180252850 Alkaloid T3O medium borderline
HhamSuperscaffold180253080 Alkaloid T3O medium pass
HhamSuperscaffold180253450 Alkaloid T3O medium borderline
HhamSuperscaffold190272070 Alkaloid T3O medium pass