PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
HhamSuperscaffold190273810 Alkaloid T3O medium pass
HhamSuperscaffold190274040 Alkaloid T3O medium borderline
HhamSuperscaffold190277670 Alkaloid T3O medium pass
HhamSuperscaffold190283000 Alkaloid T3O low borderline
HhamSuperscaffold190284030 Alkaloid T3O medium pass
HhamSuperscaffold190284240 Alkaloid T3O medium borderline
HhamSuperscaffold190284250 Alkaloid T3O medium borderline
HhamSuperscaffold190286980 Alkaloid T3O medium pass
HhamSuperscaffold190287280 Alkaloid T3O low borderline
HhamSuperscaffold190287920 Alkaloid T3O low borderline
HhamSuperscaffold200337160 Alkaloid T3O medium borderline
HhamSuperscaffold200338430 Alkaloid T3O medium borderline
HhamSuperscaffold200340560 Alkaloid T3O medium borderline
HhamSuperscaffold200340580 Alkaloid T3O medium borderline
HhamSuperscaffold200348010 Alkaloid T3O medium borderline
HhamSuperscaffold20290600 Alkaloid T3O medium pass
HhamSuperscaffold20295250 Alkaloid T3O medium borderline
HhamSuperscaffold20304310 Alkaloid T3O medium pass
HhamSuperscaffold20308680 Alkaloid T3O medium pass
HhamSuperscaffold20310990 Alkaloid T3O medium pass
HhamSuperscaffold20314890 Alkaloid T3O medium pass
HhamSuperscaffold20325470 Alkaloid T3O medium borderline
HhamSuperscaffold20331430 Alkaloid T3O medium borderline
HhamSuperscaffold20333420 Alkaloid T3O medium pass
HhamSuperscaffold20334370 Alkaloid T3O medium borderline
HhamSuperscaffold20334380 Alkaloid T3O medium borderline
HhamSuperscaffold210352300 Alkaloid T3O low borderline
HhamSuperscaffold210354450 Alkaloid T3O medium pass
HhamSuperscaffold210357100 Alkaloid T3O medium borderline
HhamSuperscaffold210362870 Alkaloid T3O medium pass
HhamSuperscaffold220377990 Alkaloid T3O medium pass
HhamSuperscaffold220378750 Alkaloid T3O medium pass
HhamSuperscaffold220383490 Alkaloid T3O medium pass
HhamSuperscaffold220383590 Alkaloid T3O medium pass
HhamSuperscaffold220384570 Alkaloid T3O medium borderline
HhamSuperscaffold220384650 Alkaloid T3O medium borderline
HhamSuperscaffold220385910 Alkaloid T3O medium pass
HhamSuperscaffold230390980 Alkaloid T3O medium borderline
HhamSuperscaffold230392830 Alkaloid T3O low borderline
HhamSuperscaffold230399610 Alkaloid T3O medium pass
HhamSuperscaffold230401040 Alkaloid T3O medium borderline
HhamSuperscaffold230401370 Alkaloid T3O medium pass
HhamSuperscaffold230404270 Alkaloid T3O medium borderline
HhamSuperscaffold230407310 Alkaloid T3O medium pass
HhamSuperscaffold230408040 Alkaloid T3O medium borderline
HhamSuperscaffold230409410 Alkaloid T3O medium borderline
HhamSuperscaffold230409450 Alkaloid T3O medium borderline
HhamSuperscaffold230409460 Alkaloid T3O medium borderline
HhamSuperscaffold240421220 Alkaloid T3O medium borderline
HhamSuperscaffold240421680 Alkaloid T3O medium borderline