PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
HhamSuperscaffold240427050 Alkaloid T3O medium borderline
HhamSuperscaffold240430550 Alkaloid T3O low borderline
HhamSuperscaffold240439290 Alkaloid T3O medium pass
HhamSuperscaffold250446100 Alkaloid T3O medium pass
HhamSuperscaffold250446120 Alkaloid T3O medium pass
HhamSuperscaffold250446670 Alkaloid T3O medium pass
HhamSuperscaffold250447150 Alkaloid T3O medium pass
HhamSuperscaffold250450700 Alkaloid T3O medium borderline
HhamSuperscaffold250450710 Alkaloid T3O medium borderline
HhamSuperscaffold250450720 Alkaloid T3O medium borderline
HhamSuperscaffold250451330 Alkaloid T3O medium borderline
HhamSuperscaffold250451340 Alkaloid T3O medium borderline
HhamSuperscaffold250451600 Alkaloid T3O medium borderline
HhamSuperscaffold250454510 Alkaloid T3O medium pass
HhamSuperscaffold250455720 Alkaloid T3O medium borderline
HhamSuperscaffold250456440 Alkaloid T3O medium borderline
HhamSuperscaffold260465260 Alkaloid T3O medium borderline
HhamSuperscaffold260465270 Alkaloid T3O medium borderline
HhamSuperscaffold260474130 Alkaloid T3O medium borderline
HhamSuperscaffold260475040 Alkaloid T3O low borderline
HhamSuperscaffold260475170 Alkaloid T3O medium borderline
HhamSuperscaffold260477210 Alkaloid T3O low borderline
HhamSuperscaffold270479520 Alkaloid T3O medium pass
HhamSuperscaffold270486380 Alkaloid T3O medium borderline
HhamSuperscaffold270488040 Alkaloid T3O medium borderline
HhamSuperscaffold270488060 Alkaloid T3O medium borderline
HhamSuperscaffold270488370 Alkaloid T3O medium borderline
HhamSuperscaffold270490130 Alkaloid T3O medium borderline
HhamSuperscaffold270490150 Alkaloid T3O medium borderline
HhamSuperscaffold280499000 Alkaloid T3O medium pass
HhamSuperscaffold280505920 Alkaloid T3O medium borderline
HhamSuperscaffold280507030 Alkaloid T3O medium borderline
HhamSuperscaffold290510800 Alkaloid T3O medium pass
HhamSuperscaffold290516600 Alkaloid T3O medium borderline
HhamSuperscaffold290516610 Alkaloid T3O medium borderline
HhamSuperscaffold290517220 Alkaloid T3O medium pass
HhamSuperscaffold290517670 Alkaloid T3O medium borderline
HhamSuperscaffold290526430 Alkaloid T3O medium pass
HhamSuperscaffold290526440 Alkaloid T3O medium borderline
HhamSuperscaffold300594060 Alkaloid T3O low borderline
HhamSuperscaffold300596830 Alkaloid T3O medium borderline
HhamSuperscaffold30539430 Alkaloid T3O low borderline
HhamSuperscaffold30548870 Alkaloid T3O medium pass
HhamSuperscaffold30551480 Alkaloid T3O medium pass
HhamSuperscaffold30552440 Alkaloid T3O medium pass
HhamSuperscaffold30552650 Alkaloid T3O medium pass
HhamSuperscaffold30555670 Alkaloid T3O low borderline
HhamSuperscaffold30555920 Alkaloid T3O medium borderline
HhamSuperscaffold30556660 Alkaloid T3O low borderline
HhamSuperscaffold30556960 Alkaloid T3O medium borderline