PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
HhamSuperscaffold30558320 Alkaloid T3O medium pass
HhamSuperscaffold30559180 Alkaloid T3O medium borderline
HhamSuperscaffold30559310 Alkaloid T3O medium borderline
HhamSuperscaffold30571180 Alkaloid T3O medium pass
HhamSuperscaffold30574440 Alkaloid T3O medium pass
HhamSuperscaffold30574470 Alkaloid T3O medium pass
HhamSuperscaffold30578980 Alkaloid T3O medium pass
HhamSuperscaffold30579510 Alkaloid T3O medium borderline
HhamSuperscaffold30580910 Alkaloid T3O medium borderline
HhamSuperscaffold30583790 Alkaloid T3O medium borderline
HhamSuperscaffold30584050 Alkaloid T3O medium pass
HhamSuperscaffold310603980 Alkaloid T3O medium borderline
HhamSuperscaffold310605320 Alkaloid T3O medium borderline
HhamSuperscaffold310607710 Alkaloid T3O medium borderline
HhamSuperscaffold310608940 Alkaloid T3O low borderline
HhamSuperscaffold310612100 Alkaloid T3O medium borderline
HhamSuperscaffold320622140 Alkaloid T3O medium borderline
HhamSuperscaffold320623620 Alkaloid T3O medium pass
HhamSuperscaffold320629090 Alkaloid T3O medium borderline
HhamSuperscaffold320634200 Alkaloid T3O medium borderline
HhamSuperscaffold320634770 Alkaloid T3O medium borderline
HhamSuperscaffold320634780 Alkaloid T3O medium borderline
HhamSuperscaffold320634790 Alkaloid T3O medium borderline
HhamSuperscaffold320634810 Alkaloid T3O medium borderline
HhamSuperscaffold330638340 Alkaloid T3O medium borderline
HhamSuperscaffold330638630 Alkaloid T3O low borderline
HhamSuperscaffold330638650 Alkaloid T3O medium pass
HhamSuperscaffold330640870 Alkaloid T3O medium borderline
HhamSuperscaffold330640890 Alkaloid T3O medium borderline
HhamSuperscaffold330640900 Alkaloid T3O medium borderline
HhamSuperscaffold330641280 Alkaloid T3O medium borderline
HhamSuperscaffold330641350 Alkaloid T3O medium borderline
HhamSuperscaffold330644080 Alkaloid T3O medium borderline
HhamSuperscaffold330647560 Alkaloid T3O medium borderline
HhamSuperscaffold330651240 Alkaloid T3O medium pass
HhamSuperscaffold330651760 Alkaloid T3O medium pass
HhamSuperscaffold340659760 Alkaloid T3O medium pass
HhamSuperscaffold340659820 Alkaloid T3O medium borderline
HhamSuperscaffold340661100 Alkaloid T3O medium borderline
HhamSuperscaffold340665890 Alkaloid T3O medium borderline
HhamSuperscaffold340665900 Alkaloid T3O medium borderline
HhamSuperscaffold340665920 Alkaloid T3O medium borderline
HhamSuperscaffold340665930 Alkaloid T3O medium borderline
HhamSuperscaffold350682400 Alkaloid T3O medium borderline
HhamSuperscaffold360687720 Alkaloid T3O low borderline
HhamSuperscaffold360691120 Alkaloid T3O medium borderline
HhamSuperscaffold370701430 Alkaloid T3O medium borderline
HhamSuperscaffold370701450 Alkaloid T3O medium borderline
HhamSuperscaffold370701470 Alkaloid T3O medium borderline
HhamSuperscaffold370707710 Alkaloid T3O medium pass