PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
HhamSuperscaffold370708830 Alkaloid T3O low borderline
HhamSuperscaffold370710920 Alkaloid T3O low borderline
HhamSuperscaffold370713810 Alkaloid T3O medium borderline
HhamSuperscaffold370713830 Alkaloid T3O medium borderline
HhamSuperscaffold370713840 Alkaloid T3O medium borderline
HhamSuperscaffold370713850 Alkaloid T3O medium borderline
HhamSuperscaffold380716890 Alkaloid T3O medium borderline
HhamSuperscaffold380716900 Alkaloid T3O medium borderline
HhamSuperscaffold380718890 Alkaloid T3O medium pass
HhamSuperscaffold380719550 Alkaloid T3O medium borderline
HhamSuperscaffold380719580 Alkaloid T3O medium borderline
HhamSuperscaffold380719600 Alkaloid T3O medium borderline
HhamSuperscaffold380719610 Alkaloid T3O medium borderline
HhamSuperscaffold390735020 Alkaloid T3O medium borderline
HhamSuperscaffold390737340 Alkaloid T3O medium borderline
HhamSuperscaffold390738290 Alkaloid T3O medium pass
HhamSuperscaffold390739370 Alkaloid T3O medium borderline
HhamSuperscaffold390748210 Alkaloid T3O low borderline
HhamSuperscaffold400786900 Alkaloid T3O medium pass
HhamSuperscaffold400787870 Alkaloid T3O medium borderline
HhamSuperscaffold400791350 Alkaloid T3O medium borderline
HhamSuperscaffold400792130 Alkaloid T3O medium borderline
HhamSuperscaffold400792700 Alkaloid T3O medium pass
HhamSuperscaffold400793640 Alkaloid T3O low borderline
HhamSuperscaffold400794820 Alkaloid T3O medium pass
HhamSuperscaffold400795660 Alkaloid T3O medium pass
HhamSuperscaffold400797200 Alkaloid T3O medium borderline
HhamSuperscaffold400797400 Alkaloid T3O medium borderline
HhamSuperscaffold400800110 Alkaloid T3O medium borderline
HhamSuperscaffold40761160 Alkaloid T3O low borderline
HhamSuperscaffold40763570 Alkaloid T3O medium borderline
HhamSuperscaffold40763580 Alkaloid T3O medium borderline
HhamSuperscaffold40775080 Alkaloid T3O low borderline
HhamSuperscaffold40775100 Alkaloid T3O low borderline
HhamSuperscaffold410801240 Alkaloid T3O medium borderline
HhamSuperscaffold410803620 Alkaloid T3O high pass
HhamSuperscaffold410805100 Alkaloid T3O medium borderline
HhamSuperscaffold410806090 Alkaloid T3O medium pass
HhamSuperscaffold410808930 Alkaloid T3O low borderline
HhamSuperscaffold410811370 Alkaloid T3O medium borderline
HhamSuperscaffold420817740 Alkaloid T3O high pass
HhamSuperscaffold420819020 Alkaloid T3O medium borderline
HhamSuperscaffold420819030 Alkaloid T3O medium borderline
HhamSuperscaffold420819090 Alkaloid T3O medium borderline
HhamSuperscaffold420820200 Alkaloid T3O medium borderline
HhamSuperscaffold420820210 Alkaloid T3O medium borderline
HhamSuperscaffold420821540 Alkaloid T3O medium borderline
HhamSuperscaffold420822400 Alkaloid T3O low borderline
HhamSuperscaffold420827980 Alkaloid T3O medium pass
HhamSuperscaffold420829280 Alkaloid T3O medium borderline