PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
HhamSuperscaffold100060290 Alkaloid TRI/TRII low borderline
HhamSuperscaffold10006310 Alkaloid TRI/TRII medium pass
HhamSuperscaffold100064130 Alkaloid TRI/TRII medium pass
HhamSuperscaffold10010430 Alkaloid TRI/TRII medium pass
HhamSuperscaffold10020120 Alkaloid TRI/TRII medium pass
HhamSuperscaffold110075830 Alkaloid TRI/TRII medium pass
HhamSuperscaffold110076010 Alkaloid TRI/TRII medium pass
HhamSuperscaffold110083760 Alkaloid TRI/TRII medium pass
HhamSuperscaffold110090160 Alkaloid TRI/TRII medium pass
HhamSuperscaffold120117490 Alkaloid TRI/TRII medium pass
HhamSuperscaffold120121230 Alkaloid TRI/TRII medium pass
HhamSuperscaffold130144450 Alkaloid TRI/TRII medium pass
HhamSuperscaffold130148860 Alkaloid TRI/TRII medium pass
HhamSuperscaffold130148940 Alkaloid TRI/TRII medium pass
HhamSuperscaffold140160810 Alkaloid TRI/TRII low borderline
HhamSuperscaffold140162290 Alkaloid TRI/TRII medium pass
HhamSuperscaffold150199050 Alkaloid TRI/TRII medium pass
HhamSuperscaffold160206950 Alkaloid TRI/TRII medium pass
HhamSuperscaffold160208650 Alkaloid TRI/TRII medium pass
HhamSuperscaffold160208660 Alkaloid TRI/TRII medium pass
HhamSuperscaffold160208680 Alkaloid TRI/TRII medium pass
HhamSuperscaffold160208690 Alkaloid TRI/TRII medium pass
HhamSuperscaffold160208700 Alkaloid TRI/TRII medium pass
HhamSuperscaffold170228630 Alkaloid TRI/TRII low borderline
HhamSuperscaffold170231000 Alkaloid TRI/TRII medium pass
HhamSuperscaffold170232580 Alkaloid TRI/TRII low borderline
HhamSuperscaffold180247040 Alkaloid TRI/TRII low borderline
HhamSuperscaffold180259540 Alkaloid TRI/TRII medium pass
HhamSuperscaffold190278070 Alkaloid TRI/TRII medium pass
HhamSuperscaffold200351100 Alkaloid TRI/TRII medium pass
HhamSuperscaffold20318810 Alkaloid TRI/TRII low borderline
HhamSuperscaffold20319290 Alkaloid TRI/TRII medium pass
HhamSuperscaffold20326200 Alkaloid TRI/TRII medium pass
HhamSuperscaffold20326210 Alkaloid TRI/TRII medium pass
HhamSuperscaffold20326340 Alkaloid TRI/TRII medium pass
HhamSuperscaffold20327510 Alkaloid TRI/TRII medium pass
HhamSuperscaffold20328020 Alkaloid TRI/TRII medium pass
HhamSuperscaffold210362000 Alkaloid TRI/TRII medium pass
HhamSuperscaffold220379670 Alkaloid TRI/TRII medium pass
HhamSuperscaffold220381020 Alkaloid TRI/TRII medium pass
HhamSuperscaffold220382180 Alkaloid TRI/TRII low borderline
HhamSuperscaffold220386980 Alkaloid TRI/TRII medium pass
HhamSuperscaffold230397280 Alkaloid TRI/TRII medium pass
HhamSuperscaffold230405080 Alkaloid TRI/TRII medium pass
HhamSuperscaffold230405930 Alkaloid TRI/TRII medium pass
HhamSuperscaffold240417910 Alkaloid TRI/TRII medium pass
HhamSuperscaffold240417920 Alkaloid TRI/TRII medium pass
HhamSuperscaffold240420820 Alkaloid TRI/TRII medium pass
HhamSuperscaffold240428870 Alkaloid TRI/TRII medium pass
HhamSuperscaffold240431640 Alkaloid TRI/TRII medium pass