PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
HhamSuperscaffold240436700 Alkaloid TRI/TRII low borderline
HhamSuperscaffold250452560 Alkaloid TRI/TRII medium pass
HhamSuperscaffold270486000 Alkaloid TRI/TRII medium pass
HhamSuperscaffold270487770 Alkaloid TRI/TRII low borderline
HhamSuperscaffold270493840 Alkaloid TRI/TRII low borderline
HhamSuperscaffold280503960 Alkaloid TRI/TRII low borderline
HhamSuperscaffold280508510 Alkaloid TRI/TRII medium pass
HhamSuperscaffold300599800 Alkaloid TRI/TRII medium pass
HhamSuperscaffold30547990 Alkaloid TRI/TRII medium pass
HhamSuperscaffold30573440 Alkaloid TRI/TRII medium pass
HhamSuperscaffold310614610 Alkaloid TRI/TRII low borderline
HhamSuperscaffold320624890 Alkaloid TRI/TRII low borderline
HhamSuperscaffold320626200 Alkaloid TRI/TRII medium pass
HhamSuperscaffold320626220 Alkaloid TRI/TRII medium pass
HhamSuperscaffold320626230 Alkaloid TRI/TRII medium pass
HhamSuperscaffold320628690 Alkaloid TRI/TRII medium pass
HhamSuperscaffold340662910 Alkaloid TRI/TRII medium pass
HhamSuperscaffold350673400 Alkaloid TRI/TRII medium pass
HhamSuperscaffold350673410 Alkaloid TRI/TRII low borderline
HhamSuperscaffold360694340 Alkaloid TRI/TRII medium pass
HhamSuperscaffold370698680 Alkaloid TRI/TRII medium pass
HhamSuperscaffold380715900 Alkaloid TRI/TRII medium borderline
HhamSuperscaffold380722630 Alkaloid TRI/TRII medium pass
HhamSuperscaffold380724270 Alkaloid TRI/TRII medium pass
HhamSuperscaffold380724280 Alkaloid TRI/TRII medium pass
HhamSuperscaffold380724290 Alkaloid TRI/TRII medium pass
HhamSuperscaffold400789600 Alkaloid TRI/TRII medium pass
HhamSuperscaffold40773010 Alkaloid TRI/TRII medium pass
HhamSuperscaffold40773960 Alkaloid TRI/TRII medium pass
HhamSuperscaffold40780340 Alkaloid TRI/TRII low borderline
HhamSuperscaffold430841420 Alkaloid TRI/TRII medium pass
HhamSuperscaffold430842580 Alkaloid TRI/TRII medium pass
HhamSuperscaffold430847560 Alkaloid TRI/TRII low borderline
HhamSuperscaffold440848380 Alkaloid TRI/TRII medium pass
HhamSuperscaffold440848390 Alkaloid TRI/TRII medium pass
HhamSuperscaffold450864860 Alkaloid TRI/TRII medium pass
HhamSuperscaffold450873830 Alkaloid TRI/TRII medium pass
HhamSuperscaffold460882490 Alkaloid TRI/TRII low borderline
HhamSuperscaffold50901140 Alkaloid TRI/TRII medium pass
HhamSuperscaffold50901170 Alkaloid TRI/TRII medium pass
HhamSuperscaffold50901180 Alkaloid TRI/TRII low borderline
HhamSuperscaffold50902600 Alkaloid TRI/TRII medium pass
HhamSuperscaffold50916310 Alkaloid TRI/TRII low borderline
HhamSuperscaffold50920330 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60928560 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60928570 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60928580 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60928590 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60959310 Alkaloid TRI/TRII medium pass
HhamSuperscaffold70962690 Alkaloid TRI/TRII medium pass