Hibiscus hamabo (hibiscus_hamabo)
Imported from atlas release summary for Hibiscus hamabo.
4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
4039
Candidate Genes
C4H
6.55%
C3'H/CYP98A
5.88%
BAHD
5.79%
CYP76
3.97%
POD
3.88%
4CL
3.86%
IFS
3.78%
T3O
3.62%
Other Families
62.67%
More Families (97)
F3H
371
3.59%
UGT
296
2.87%
7DLGT
258
2.5%
UFGT
253
2.45%
NMT
243
2.35%
CODM/T6ODM
226
2.19%
DWF4/CYP90B1
214
2.07%
F3'H/CYP75B
205
1.99%
BR6OX2/CYP85A2
204
1.98%
H6H
198
1.92%
STR
178
1.72%
LAC
173
1.68%
CAD
165
1.6%
CAS
146
1.41%
CYP71
144
1.39%
SMT1/SMT2/SMT3
121
1.17%
TRI/TRII
110
1.07%
CYP90D1
110
1.07%
TPS
110
1.07%
CSE
101
0.98%
HCT
100
0.97%
GES
99
0.96%
COMT
95
0.92%
IFR
93
0.9%
PYKS
83
0.8%
T16H
83
0.8%
IO
82
0.79%
RAS
78
0.76%
F5H/CYP84A
74
0.72%
G8O/G8H
73
0.71%
TAT
73
0.71%
GS
71
0.69%
BBE
70
0.68%
ANR
70
0.68%
7DLH
69
0.67%
CPD/CYP90A1
67
0.65%
PAL
66
0.64%
NCS
64
0.62%
FNS
64
0.62%
PMT
61
0.59%
SLS
57
0.55%
F3'5'H/CYP75A
57
0.55%
16OMT
55
0.53%
ANS/LDOX
50
0.48%
BR6OX1/CYP85A1
47
0.46%
CCR
46
0.45%
SGD
43
0.42%
COR
42
0.41%
CYP51G1
37
0.36%
8HGO
35
0.34%
DFR
35
0.34%
SQE
33
0.32%
CNMT
31
0.3%
CPR
28
0.27%
FPPS
27
0.26%
CCoAOMT
23
0.22%
ROT3/CYP90C1
23
0.22%
GGPPS
23
0.22%
SMO1/SMO2
22
0.21%
MPO
21
0.2%
LAMT
21
0.2%
DXS
21
0.2%
AACT
20
0.19%
HMGR
20
0.19%
CHS
19
0.18%
TYDC_DDC
18
0.17%
ISY
17
0.16%
CYP719
16
0.15%
MVD
16
0.15%
CYP80B1
14
0.14%
SQS/FDFT1
14
0.14%
MVK
14
0.14%
HMGS
13
0.13%
HPPR
12
0.12%
IDI
11
0.11%
TDC
10
0.1%
CHI
10
0.1%
XMT_MXMT_DXMT
8
0.08%
ADC
8
0.08%
DWF1
8
0.08%
FLS
7
0.07%
DET2
7
0.07%
HDR/IspH
7
0.07%
6OMT_4OMT_SOMT
6
0.06%
ODC
6
0.06%
MCT/IspD
6
0.06%
DXR
6
0.06%
MDS/IspF
6
0.06%
PMK
6
0.06%
HYD1
5
0.05%
HDS/IspG
5
0.05%
FK
4
0.04%
CPI1
4
0.04%
DWF7
3
0.03%
DWF5
3
0.03%
CMK/IspE
3
0.03%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1160 | 21 | BAHD (466) | View species results |
| Phenylpropanoid pathway | 967 | 13 | POD (369) | View species results |
| Alkaloid pathway | 814 | 27 | NMT (125) | View species results |
| Flavonoid pathway | 465 | 14 | UFGT (231) | View species results |
| Rosmarinic acid pathway | 372 | 7 | C4H (135) | View species results |
| Steroid pathway | 261 | 15 | CAS (118) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 4033 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 776 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| HhamSuperscaffold150197610 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| HhamSuperscaffold160204940 | Terpenoid | UGT | low | borderline | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| HhamSuperscaffold170221430 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| HhamSuperscaffold170224630 | Terpenoid | UGT | low | borderline | UGT__00026__sp_D3THI6_U7A15_MALDO |
| HhamSuperscaffold170224640 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| HhamSuperscaffold170224650 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| HhamSuperscaffold170232290 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| HhamSuperscaffold170234400 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| HhamSuperscaffold170234410 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| HhamSuperscaffold170235710 | Terpenoid | UGT | medium | pass | UGT__00006__sp_A0A0A1HA03_708C1_FAGES |
| HhamSuperscaffold170238340 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| HhamSuperscaffold180243840 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| HhamSuperscaffold180243850 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| HhamSuperscaffold180243860 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| HhamSuperscaffold180243880 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| HhamSuperscaffold180248070 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| HhamSuperscaffold180248080 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| HhamSuperscaffold180254790 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| HhamSuperscaffold180259320 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| HhamSuperscaffold180260890 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| HhamSuperscaffold180261410 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| HhamSuperscaffold190270080 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| HhamSuperscaffold190272900 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| HhamSuperscaffold190272920 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| HhamSuperscaffold190272930 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| HhamSuperscaffold190272960 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| HhamSuperscaffold190272980 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| HhamSuperscaffold190273000 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| HhamSuperscaffold190273520 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| HhamSuperscaffold190273550 | Terpenoid | UGT | low | borderline | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| HhamSuperscaffold190274670 | Terpenoid | UGT | medium | pass | UGT__00101__sp_Q9LVR1_U72E2_ARATH |
| HhamSuperscaffold190277440 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| HhamSuperscaffold190280780 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| HhamSuperscaffold190280790 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| HhamSuperscaffold190280800 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| HhamSuperscaffold190281080 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| HhamSuperscaffold190282270 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| HhamSuperscaffold190282280 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| HhamSuperscaffold190285800 | Terpenoid | UGT | low | borderline | UGT__00103__sp_Q9M156_U72B1_ARATH |
| HhamSuperscaffold200338760 | Terpenoid | UGT | medium | pass | UGT__00043__sp_K4GHS2_73C13_BARVU |
| HhamSuperscaffold200338790 | Terpenoid | UGT | medium | pass | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| HhamSuperscaffold20289840 | Terpenoid | UGT | low | borderline | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| HhamSuperscaffold20289860 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| HhamSuperscaffold20290080 | Terpenoid | UGT | medium | pass | UGT__00040__sp_K4D422_U73C4_SOLLC |
| HhamSuperscaffold20294120 | Terpenoid | UGT | medium | pass | UGT__00023__sp_B3TKC8_88F1G_MALDO |
| HhamSuperscaffold20302350 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| HhamSuperscaffold20305200 | Terpenoid | UGT | medium | pass | UGT__00050__sp_O22822_U74F2_ARATH |
| HhamSuperscaffold20305730 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| HhamSuperscaffold20305750 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| HhamSuperscaffold20305770 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |