PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
HhamSuperscaffold60952850 Alkaloid 16OMT medium borderline
HhamSuperscaffold60953140 Alkaloid 16OMT medium borderline
HhamSuperscaffold70978720 Alkaloid 16OMT medium borderline
HhamSuperscaffold81008430 Alkaloid 16OMT medium borderline
HhamSuperscaffold81017340 Alkaloid 16OMT medium borderline
HhamSuperscaffold10026430 Alkaloid 6OMT_4OMT_SOMT medium borderline
HhamSuperscaffold200338510 Alkaloid 6OMT_4OMT_SOMT medium borderline
HhamSuperscaffold200338530 Alkaloid 6OMT_4OMT_SOMT medium borderline
HhamSuperscaffold410812450 Alkaloid 6OMT_4OMT_SOMT medium borderline
HhamSuperscaffold420829070 Alkaloid 6OMT_4OMT_SOMT medium borderline
HhamSuperscaffold440858870 Alkaloid 6OMT_4OMT_SOMT medium pass
HhamSuperscaffold10003710 Alkaloid 7DLGT low borderline
HhamSuperscaffold100057420 Alkaloid 7DLGT high pass
HhamSuperscaffold10006240 Alkaloid 7DLGT low borderline
HhamSuperscaffold10006250 Alkaloid 7DLGT low borderline
HhamSuperscaffold100065050 Alkaloid 7DLGT medium pass
HhamSuperscaffold100069440 Alkaloid 7DLGT low borderline
HhamSuperscaffold10020990 Alkaloid 7DLGT high pass
HhamSuperscaffold10038390 Alkaloid 7DLGT low borderline
HhamSuperscaffold10039740 Alkaloid 7DLGT medium pass
HhamSuperscaffold10039750 Alkaloid 7DLGT medium pass
HhamSuperscaffold10042550 Alkaloid 7DLGT low borderline
HhamSuperscaffold10043010 Alkaloid 7DLGT medium pass
HhamSuperscaffold110083320 Alkaloid 7DLGT low borderline
HhamSuperscaffold110083330 Alkaloid 7DLGT medium pass
HhamSuperscaffold110083900 Alkaloid 7DLGT high pass
HhamSuperscaffold110083910 Alkaloid 7DLGT high pass
HhamSuperscaffold110086000 Alkaloid 7DLGT low borderline
HhamSuperscaffold110087860 Alkaloid 7DLGT low borderline
HhamSuperscaffold110095500 Alkaloid 7DLGT medium pass
HhamSuperscaffold110095510 Alkaloid 7DLGT low borderline
HhamSuperscaffold110095520 Alkaloid 7DLGT medium pass
HhamSuperscaffold110099580 Alkaloid 7DLGT medium pass
HhamSuperscaffold120109900 Alkaloid 7DLGT high pass
HhamSuperscaffold120109910 Alkaloid 7DLGT high pass
HhamSuperscaffold120114060 Alkaloid 7DLGT high pass
HhamSuperscaffold120121300 Alkaloid 7DLGT medium pass
HhamSuperscaffold120123920 Alkaloid 7DLGT low borderline
HhamSuperscaffold130153570 Alkaloid 7DLGT medium pass
HhamSuperscaffold140159660 Alkaloid 7DLGT medium pass
HhamSuperscaffold140161470 Alkaloid 7DLGT high pass
HhamSuperscaffold140167460 Alkaloid 7DLGT medium pass
HhamSuperscaffold140170530 Alkaloid 7DLGT low borderline
HhamSuperscaffold140176580 Alkaloid 7DLGT low borderline
HhamSuperscaffold140176620 Alkaloid 7DLGT medium pass
HhamSuperscaffold150179070 Alkaloid 7DLGT low borderline
HhamSuperscaffold150192090 Alkaloid 7DLGT low borderline
HhamSuperscaffold150194980 Alkaloid 7DLGT medium pass
HhamSuperscaffold150196420 Alkaloid 7DLGT high pass
HhamSuperscaffold150196440 Alkaloid 7DLGT medium pass