PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold70987140 Alkaloid NMT medium pass
HhamSuperscaffold70987920 Alkaloid NMT low borderline
HhamSuperscaffold81000910 Alkaloid NMT low borderline
HhamSuperscaffold81005130 Alkaloid NMT medium borderline
HhamSuperscaffold81008370 Alkaloid NMT low borderline
HhamSuperscaffold81008980 Alkaloid NMT medium pass
HhamSuperscaffold81012340 Alkaloid NMT medium pass
HhamSuperscaffold81015860 Alkaloid NMT low borderline
HhamSuperscaffold81016640 Alkaloid NMT medium borderline
HhamSuperscaffold81016650 Alkaloid NMT medium borderline
HhamSuperscaffold81017350 Alkaloid NMT medium borderline
HhamSuperscaffold81022320 Alkaloid NMT medium pass
HhamSuperscaffold81022330 Alkaloid NMT medium pass
HhamSuperscaffold91029370 Alkaloid NMT medium pass
HhamSuperscaffold91032550 Alkaloid NMT medium pass
HhamSuperscaffold91034050 Alkaloid NMT medium pass
HhamSuperscaffold91040900 Alkaloid NMT medium borderline
HhamSuperscaffold91053960 Alkaloid NMT medium pass
Hhamunanchor4171064980 Alkaloid NMT medium pass
HhamSuperscaffold110080260 Alkaloid ODC medium pass
HhamSuperscaffold20293960 Alkaloid ODC medium pass
HhamSuperscaffold20319490 Alkaloid ODC medium pass
HhamSuperscaffold320620060 Alkaloid ODC low borderline
HhamSuperscaffold320630210 Alkaloid ODC low borderline
HhamSuperscaffold70965160 Alkaloid ODC low borderline
HhamSuperscaffold10002860 Alkaloid PMT low borderline
HhamSuperscaffold10002880 Alkaloid PMT low borderline
HhamSuperscaffold100048690 Alkaloid PMT low borderline
HhamSuperscaffold100049400 Alkaloid PMT medium pass
HhamSuperscaffold100055420 Alkaloid PMT low borderline
HhamSuperscaffold100074090 Alkaloid PMT medium pass
HhamSuperscaffold110084230 Alkaloid PMT low borderline
HhamSuperscaffold110084710 Alkaloid PMT medium pass
HhamSuperscaffold110084760 Alkaloid PMT low borderline
HhamSuperscaffold120117080 Alkaloid PMT low borderline
HhamSuperscaffold130148510 Alkaloid PMT low borderline
HhamSuperscaffold130152540 Alkaloid PMT low borderline
HhamSuperscaffold130152550 Alkaloid PMT low borderline
HhamSuperscaffold130152570 Alkaloid PMT low borderline
HhamSuperscaffold140173920 Alkaloid PMT medium borderline
HhamSuperscaffold150181840 Alkaloid PMT medium borderline
HhamSuperscaffold160210940 Alkaloid PMT low borderline
HhamSuperscaffold160220000 Alkaloid PMT medium pass
HhamSuperscaffold170230960 Alkaloid PMT medium pass
HhamSuperscaffold180245040 Alkaloid PMT low borderline
HhamSuperscaffold180248640 Alkaloid PMT low borderline
HhamSuperscaffold200335860 Alkaloid PMT low borderline
HhamSuperscaffold200346390 Alkaloid PMT medium pass
HhamSuperscaffold20321750 Alkaloid PMT low borderline
HhamSuperscaffold210352370 Alkaloid PMT low borderline